Gene SeSA_A1302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1302 
SymbolsifA 
ID6519444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1274489 
End bp1275499 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content40% 
IMG OID642746423 
Productsecreted effector protein 
Protein accessionYP_002114231 
Protein GI194734056 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.788445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATTA CTATAGGGAA TGGTTTTTTA AAAAGTGAAA TCCTTACCAA CTCCCCAAGG 
AATACGAAAG AAGCATGGTG GAAAGTTTTA TGGGAAAAAA TTAAAGACTT CTTTTTTTCT 
ACTGGCAAAG CAAAAGCGGA CAGTTGTCTA CATGAGATGT TGTTTGCCGA TCGCACCCCC 
ACACGAGAGC GGCTTACAGA GATTTTTTTT GAGTTAAAAG AGTTAGCCTG CGCATCACAA 
AGAGATAGAT TTCAGGTTTA TAATCCTAAT GAAAATGATG ACACTATTAT TCTTCGCATC 
ATGGATCAAA ACGAAGAGAA CGAATTGTTA CGTATCACTC AAAATACCGA TGCCTTTACC 
TGTGAAGTCA TGGGGAATGC TTATTTTTTA ATAAAAGATC GCCCCGATAT TTTAAAACCG 
CATCCACAAA TGACGGCCAT GATTAATAGA AGATATAGCG AAATCGTAGA TTACCCCCTC 
CCTTCGACAT TATGTCTCAA TCCTGCTGGC GCGCCGACAT TATCGGTTCC ATTAGACAAC 
ATAAAGGGGT ATTTATATTC TGAATGGAGA AAAGGAAATT TAGATGAGTG GAAAACGCAA 
GAAAAGGTAA CCTACCTGGC AGCGAAAATT CAGTCTGGGA TTGAAAAGAC AACGCGCATT 
TTACAGCATG CGAATATATC CGAAAGTACT CAGCAAAACG CATTTTTAGA AACAATGACG 
ATGTGTGGCT TAAAACAGAT TGAAATACCA CCACCGCATA CCCACATACC TATTGAAAAA 
ATGGTAGAAG AGGTTTTACT GGCGGATAAG ACGTTTCAGG CGTTCCTTGT AACGGATCCC 
AGCGCCAGCC TAAGCATGTT AGCTGAGATA ATCGAAACCC TCTCTGATCA GGTTTTTCAC 
GCCATTTTTA GAATAGACCC CCAGGCTATA CAAAAAATGG CGGAAGAACA GTTAACCACG 
CTACACGTTC GCTCAGAACA ACAAAGCGGC TGTTTATGTT GTTTTTTATA A
 
Protein sequence
MPITIGNGFL KSEILTNSPR NTKEAWWKVL WEKIKDFFFS TGKAKADSCL HEMLFADRTP 
TRERLTEIFF ELKELACASQ RDRFQVYNPN ENDDTIILRI MDQNEENELL RITQNTDAFT 
CEVMGNAYFL IKDRPDILKP HPQMTAMINR RYSEIVDYPL PSTLCLNPAG APTLSVPLDN 
IKGYLYSEWR KGNLDEWKTQ EKVTYLAAKI QSGIEKTTRI LQHANISEST QQNAFLETMT 
MCGLKQIEIP PPHTHIPIEK MVEEVLLADK TFQAFLVTDP SASLSMLAEI IETLSDQVFH 
AIFRIDPQAI QKMAEEQLTT LHVRSEQQSG CLCCFL