Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0806 |
Symbol | holA |
ID | 6517928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 780802 |
End bp | 781833 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642745941 |
Product | DNA polymerase III subunit delta |
Protein accession | YP_002113764 |
Protein GI | 194736664 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1466] DNA polymerase III, delta subunit |
TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGGT TGTATCCTGA ACAACTCCGC GCGCAGCTCA ACGAAGGGCT GCGTGCGGCA TATTTATTAT TGGGCAACGA TCCGCTGCTG CTGCAGGAAA GTCAGGACGC TATTCGTCTG GCGGCTGCGT CGCAAGGCTT CGAAGAGCAC CACGCTTTTA CTCTCGATCC CAGTACCGAC TGGGGATCGC TTTTCTCACT CTGCCAGGCG ATGAGTCTGT TCGCCAGTCG TCAAACGCTG GTGCTGCAAC TGCCGGAAAA CGGGCCTAAC GCGGCAATGA ATGAGCAACT CGCCACGCTG AGCGAGCTGC TGCATGACGA CCTGTTATTA ATAGTACGCG GAAACAAGCT CACCAAAGCG CAGGAAAACG CCGCCTGGTA TACCGCGCTG GCAGACCGTA GCGTTCAGGT CAGTTGTCAA ACGCCGGAGC AGGCGCAGCT TCCCCGCTGG GTTGCCGCCA GAGCGAAAGC ACAGAATTTG CAACTGGATG ACGCCGCGAA CCAACTGCTG TGCTATTGCT ATGAGGGCAA TCTGTTGGCG CTGGCGCAGG CGCTGGAACG GCTGTCGCTG CTTTGGCCTG ACGGTAAGTT AACGCTTCCT CGCGTGGAGC AGGCCGTCAA TGACGCCGCC CACTTTACCC CTTTCCACTG GGTGGATGCG TTACTGATGG GGAAAAGCAA ACGCGCGCTG CATATTCTGC AACAGCTACG CCTTGAAGGC AGCGAGCCGG TTATTCTGCT GCGGACCCTC CAGCGAGAGC TGCTGCTACT GGTAAATCTC AAACGTCAGT CCGCGCATAT GCCGTTACGC GCGCTGTTTG ATAAACACCG GGTCTGGCAA AACCGTCGCC CCATGATCGG CGACGCGTTG CAGCGTCTCC ATCCTGCACA GCTTCGCCAG GCCGTGCAGT TACTGACGCG TACAGAAATT ACGCTCAAAC AGGATTATGG TCAGTCAGTA TGGGCAGATC TTGAAGGGCT ATCGCTCCTG CTCTGCCATA AGGCGCTGGC AGACGTATTT ATTGATGGGT GA
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Protein sequence | MIRLYPEQLR AQLNEGLRAA YLLLGNDPLL LQESQDAIRL AAASQGFEEH HAFTLDPSTD WGSLFSLCQA MSLFASRQTL VLQLPENGPN AAMNEQLATL SELLHDDLLL IVRGNKLTKA QENAAWYTAL ADRSVQVSCQ TPEQAQLPRW VAARAKAQNL QLDDAANQLL CYCYEGNLLA LAQALERLSL LWPDGKLTLP RVEQAVNDAA HFTPFHWVDA LLMGKSKRAL HILQQLRLEG SEPVILLRTL QRELLLLVNL KRQSAHMPLR ALFDKHRVWQ NRRPMIGDAL QRLHPAQLRQ AVQLLTRTEI TLKQDYGQSV WADLEGLSLL LCHKALADVF IDG
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