Gene SeSA_A0794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0794 
Symbol 
ID6517141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp769359 
End bp770312 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content51% 
IMG OID642745929 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_002113752 
Protein GI194737158 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.659097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGATA ATAATCAGGC AGAAAGACAA CCGGCCGATC AACATCTACA AGACAAACCG 
CAAATTTTCA GAACACTGAG AAATATTGAC CTCAATCTGT TGACGATTTT CGAGGCCGTA 
TATGTCCATA AAGGGATCGT CAATGCCGCG AAAATTCTTA ACCTGACGCC GTCAGCCATC 
AGCCAGTCCA TTCAAAAATT ACGGACTATA TTTCCCGATC CGCTGTTTAT TCGCAAAGGC 
CAGGGCGTAA CGCCCACGAC GTATGCTACG CATCTGCACG AATACATCAG CCAGGGGCTG 
GAATCTATTC TTGGCGCCCT GGATCTTACG GGCAGCTATG ATAAGCAACG CACCATTACG 
ATTGGCACGA CGCCTTCGGT CGGCGCGCTA GTGATGCCGA TTATTTACCA GGCCATCAGG 
CCGCGTTATC CTCAGCTTTT GCTGCGCAAC ATTCCGGTAG ACGATGCCGA AAGCCAGCTT 
AGTCAGTTTC AGACCGATCT CATTATCAAT ACCCATAGCT ATAACAACCG GAGCATCCAG 
CATCACGTCC TGTTTAGCGA TACGCTTGAG ATTGTCTGCC GCCAGCATCA CCCGTGTCTG 
GCGAACGCCA TTACTGAAGA GAGACTGAAC AGCGCGGATC ACACCTTTCT GATGCTGGAG 
GGACAACATC TTTCCCTCCT GCGCCAGCGA CTGCAGGAGA CATTTCCCGA TCAGCAAATC 
AGTTTTAGCA GCTACAATAT TTTTACCATT GCCTCGCTGA TCGCCAGCAG CGATCTGCTG 
GGACTGATGC CCACCCGCTT CTACGACTTA TTTAGCCGCT GCTGGCCGCT TGAACGCCTT 
CCCTACGCGC CGGTGAATAG TGAACAGGTC GAGTTCTCAC TGCATTACAA TAAACTGAGT 
CTGCGCGATC CGGTGCTGGA GAACGTCATT GATATCATTC GTGAGGCGTT CTGA
 
Protein sequence
MSDNNQAERQ PADQHLQDKP QIFRTLRNID LNLLTIFEAV YVHKGIVNAA KILNLTPSAI 
SQSIQKLRTI FPDPLFIRKG QGVTPTTYAT HLHEYISQGL ESILGALDLT GSYDKQRTIT 
IGTTPSVGAL VMPIIYQAIR PRYPQLLLRN IPVDDAESQL SQFQTDLIIN THSYNNRSIQ 
HHVLFSDTLE IVCRQHHPCL ANAITEERLN SADHTFLMLE GQHLSLLRQR LQETFPDQQI 
SFSSYNIFTI ASLIASSDLL GLMPTRFYDL FSRCWPLERL PYAPVNSEQV EFSLHYNKLS 
LRDPVLENVI DIIREAF