| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A0703 |
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| Symbol | |
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| ID | 6518213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 676750 |
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| End bp | 679845 |
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| Gene Length | 3096 bp |
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| Protein Length | 1031 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642745844 |
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| Product | gifsy-1 prophage VmtH |
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| Protein accession | YP_002113667 |
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| Protein GI | 194735514 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5281] Phage-related minor tail protein |
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| TIGRFAM ID | [TIGR01541] phage tail tape measure protein, lambda family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00431467 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACCAGA TAGCGAACCT GGTCATTGAT TTAAGTATCG ACAGCGCAGA GTTCCGAAAC
GAAGTTCCGC GCATTAAAAA ATTGCTGAAC GATGCGGCTG GTGACTCAGA ACGTTCAGCG
GCCCGGATGC AGCGTTTTCT GGATAAGCAG ACGGAGGCGA CGCGCCGGAC GTCCGCCGGT
CTGGAGCAGG TGACTGCCAG CAGTACCGCG TACAGTTCCG CTGTGGAGAA AAGCGCAGCG
GCCAGTACGC GTCTGGCGGC GGATGTGGAT CAGACGCGAC AGCGGGTGGA GGCACTGGGA
AGGAAACTGC GTGAGGAACA GGCGCAGTCA GCGGCTGTGG CGGCAGCACA GGACAGGACA
AGTGCTGCTT TTTACCGCCA GATTGACAGT GTAAAACAGT TAAGCGGTGG TCTGCAGGAG
CTGCAGCGTA TCCAGGCGCA GGTACGACAG GCGAAAGGAC GCGGAGATAT CTCACAGGGC
GATTATCTGG CGCTGGTGTC TGAAACCGCC AGGAAGACCC GTGAGCTTAC CGATGCCGAA
GCGCTGGCCA CGCAGAAAAA AGCACAGTTT ATACGCCGCC TGAAAGAGCA GACGACGGTA
CAGGGCCTCT CCCGTACTGA GCTGCTGCGG GTGAAGGCGG CTGAACTGGG TGTCAGCAGC
GCCGCAGATA TTTATATCCG TAAACTGGAG CGTACCGGAA CTGCCACCCA TACGCTAGGA
CTGAAAAGCG CCGCTGCCCG TCGTGAACTG GGCGTGCTGG CTGGTGAGCT GGCCCGTGGG
AATTTCGGGG CACTGCGGGG AAGTGGTATC ACGCTCGCTA ACCGCGCCGG GTGGATCGAG
CAACTGATGT CTCCGAAGGG CATGATGCTC GGCGGGCTGG CTGGCGGCGT GGCTGCTGCT
GTTTACGGGC TGGGTAAGGC CTACTATGAA GGAGCTAAAG AAAGCGAGGC GTTCAATAAA
CAGCTTATTC TGACCGGGAG TTATGCCGGA AAAACCACAG GCCAGCTTAA TGCGATGGCG
AAGTCGCTCG CCGGAAATGG CGTCACGCAG CACGACGCTG CAGGCGTGCT GGCACAGGTG
GTCGGTAGCG GAGCGTTTAC CGGGCAGGCA GTGGCAATGG TATCCCGTAC CGCGACCAGA
ATGCAGGAAA ACGTTGGACA ATCAGTGGAT GAAACCATCC GCCAGTTTAA ACGCCTGCGG
GATGATCCGG TGAATGCGGC GAAAGAACTG GACAGGACAC TGCATTTTCT GACCGCCACC
CAGCTTGAAC AAATCAGGGT ACTGGGCGAG CAGGGAAGAG TGGCTGATGC CGCGAAAATT
GCCATGTCCG CGTATTCGGA AGAAATGAAT AAGCGGATGG GGGACGTACA CGACAATCTG
GGCTGGATTG AAAGAGCATG GAATGCTGTC GGTGATGCGG CGAAGTGGGC ATGGGATCGG
ATGCTGGATA TCGGGCGGGA AGACACGCTC GATGAAAAGA TCGCGACACT GCAGGAAAAA
ATCGCGCGCG GCAGAAAAAC GCCCTGGACG GTGTCTTCCT CCCAGACTGA ATACGATCAG
CAGCAGCTGA ACGAACTTCA GGAACAGAAA CGCCAGAAGG ACCTGCTGGA TGCGAAGGCG
CAGGCAGAGC GTAATTATCA GGAAACGCAG AAACGTCGGA ACGAGCAGAA CGCCGCGCTG
AACCGGGATA ATGAAACTGA ATCCCTGCGG CACCAACGGG AGGTGGCGCG CATTACCGCC
ATGCAGTATG CCGATGCTGC TGTACGCAAT GCCGCACTGG AGCGTGAAAA TGAACGTCAT
AAAAAGGCGT TGTCACAACA GGCGAAAAAG CCAAAGACTT ACCACAACGA CGAGGCCAGG
CGACTGCTTT TGCAGTACAG CCAGCAACAG GCGCAGACTG AAGGGCAGCT TGCCGCCGCG
AAGCTTTCCA CGACCGAAAA AATGACGGAA GCGCATAAGC AGCTTTTGTC ATTTCAGCAG
CGCATCGCTG ATTTGTCCGG TAAAAAACTG ACGGCGGATG AACAAAGCGT ACTGGCACAT
AAGGATGAAA TCGCGCTTGC GCTACAGAAG CTGGATATCT CACAACAGGA TTTGCAACAC
CAGAATGCCC TTAATGAACT GAAGAAAAAG ACGCTCACAT TGACCAGCCA GCTCGCTGAC
GAAGAATCCC GCGTCAGGCA ACAGCACGCA ATGGCGCTGG CCACAATGGG TATGGGCGAT
CAGCAACGTG GCCGATACGA AGAGCGTCTG AAAATTCAGC AGCACTACCA GGAACAACTG
GAGCAGCTTA AACGCGACAG CAAGGCAAAA GGGACATACG GTTCTGACGA ATATCGTCAG
GCGGAGCAGG CGCTGAAGGG CAGTCTCGAT CGCCGGCTGG CTGAGTGGGC GGATTACAAT
GCGAAAGTTG ACGCTGCGCA GGGAGACTGG ACGCTGGGGG CGTCGCGGGC GCTGGATAAC
TTTCTGGCGC AGGGCGGCAA TGTGGCAGGC ATGACGGAGA ACGTTTTCAC AAACGCATTT
AACGGCATGG CGGACAGTAT CGCGAATTTT GCCGTGACCG GAAAGGGCAG TTTCCGGAGC
CTGACGGTCT CCATCCTGGC TGACCTTGCA AAAATGGAGG CACGTATTGC GGCTTCTAAA
CTGTTGGGTT CAGTGCTGGC AATGTTCGGC TTTGGCACAT CGGCAGGCGG CAGTACACCA
TCAGGGGCAT ACAGTTCTGC GGCGCTGTCG GTTATTCCGA ATGCGGACGG CGGCGTGTAC
CGTTCGGCAG GACTCAGCCA GTACAGCGGC AGCATTGTTA ATCGCCCGAC ATTTTTTGCT
TTTGCCAAAG GTGCCGGGGT GATGGGCGAG GCAGGACCGG AGGCAATATT ACCACTTCGT
CGTGGTGCTG ACGGTAAGCT GGGTGTCGTG GCAGCCGGTT CAGGAGGGAT GGCGATGTTT
GCGCCTGAGT ACAACATTGA AATCCACAAC GACGCCGGCA ACGGACAGAT TGGTCCGCAG
GCATTACAGG CCGTATATAA CATTGGAAAA AAAGCCGCCA TTGATTTCTG GCAACAGCAG
TCGCGTGACG GGGGTATTGC CGGAGGAGGG CGATAA
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| Protein sequence | MDQIANLVID LSIDSAEFRN EVPRIKKLLN DAAGDSERSA ARMQRFLDKQ TEATRRTSAG
LEQVTASSTA YSSAVEKSAA ASTRLAADVD QTRQRVEALG RKLREEQAQS AAVAAAQDRT
SAAFYRQIDS VKQLSGGLQE LQRIQAQVRQ AKGRGDISQG DYLALVSETA RKTRELTDAE
ALATQKKAQF IRRLKEQTTV QGLSRTELLR VKAAELGVSS AADIYIRKLE RTGTATHTLG
LKSAAARREL GVLAGELARG NFGALRGSGI TLANRAGWIE QLMSPKGMML GGLAGGVAAA
VYGLGKAYYE GAKESEAFNK QLILTGSYAG KTTGQLNAMA KSLAGNGVTQ HDAAGVLAQV
VGSGAFTGQA VAMVSRTATR MQENVGQSVD ETIRQFKRLR DDPVNAAKEL DRTLHFLTAT
QLEQIRVLGE QGRVADAAKI AMSAYSEEMN KRMGDVHDNL GWIERAWNAV GDAAKWAWDR
MLDIGREDTL DEKIATLQEK IARGRKTPWT VSSSQTEYDQ QQLNELQEQK RQKDLLDAKA
QAERNYQETQ KRRNEQNAAL NRDNETESLR HQREVARITA MQYADAAVRN AALERENERH
KKALSQQAKK PKTYHNDEAR RLLLQYSQQQ AQTEGQLAAA KLSTTEKMTE AHKQLLSFQQ
RIADLSGKKL TADEQSVLAH KDEIALALQK LDISQQDLQH QNALNELKKK TLTLTSQLAD
EESRVRQQHA MALATMGMGD QQRGRYEERL KIQQHYQEQL EQLKRDSKAK GTYGSDEYRQ
AEQALKGSLD RRLAEWADYN AKVDAAQGDW TLGASRALDN FLAQGGNVAG MTENVFTNAF
NGMADSIANF AVTGKGSFRS LTVSILADLA KMEARIAASK LLGSVLAMFG FGTSAGGSTP
SGAYSSAALS VIPNADGGVY RSAGLSQYSG SIVNRPTFFA FAKGAGVMGE AGPEAILPLR
RGADGKLGVV AAGSGGMAMF APEYNIEIHN DAGNGQIGPQ ALQAVYNIGK KAAIDFWQQQ
SRDGGIAGGG R
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