Gene SeSA_A0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0390 
Symbol 
ID6518003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp392475 
End bp393800 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content52% 
IMG OID642745542 
Productputative fimbrial usher 
Protein accessionYP_002113366 
Protein GI194738316 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.097978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTTA GTTTCCGAAC GCTATTGTTT ATCACCAGCC TGTTCGTCAG CGCCGGAACA 
TGGTCGTCAT GTATCAAAGT CACCAATAAG AGCGCGCTCT CTGACGCGGC GATAAAAGCG 
GGCTACACGG CGCAAAACTG GATCGGCGCA ACTGACACGA ATACCGGTAA TATCGGTTTG 
CCAACGGTGA TTAGCATCAG TAATAGTGAA ACATTTCAAC CCTCCGGCAC ACTATTGGCC 
AGTGGGATCG GTAACTTCCT GACGGCCGCC ACCGGAACGC CCTATTCCAG TAAGCAGGTA 
CTTTACCGCT GCGATTCCGC CGATGCCGGG AAGCTCTATG AGATGTATTC GACAAATGGC 
GATAGCGCTT TTGCGGGGGC ATTTTTTACT CCCGAAGTAG AAGGCGCTTA TTATGATGTG 
GAGCGTAATG TTGCTGTCCG TATGACAAAC CTCAGTACCG GCGAATATTA CAGCCGCTTC 
TGGAAAGAAC GCCAACTTAC CGCAGACAGT TGGTTTCAGG ATGACAAATA TATTTATATT 
CCTGCCAGCG CGTTTAGCAA CGTGCTATAT GAGATGTTTA AAATTGACTC AAGAAAATAT 
TTTGCCTACC AGAATCCAAT GGACCGAGAT ACCTGGACGC AGCCTCGGGG TTATATCGCC 
TTTAAAGGCC CAGGCTTGAT TACCGAGCGG ATCAAAGCGG GACTGGATCA TGCCAGCGAT 
TATTATGGCT GGCCCGGCTA TTGGCCCGGG GCATGGAGTA CATATAATAG CGTCACCTAT 
GTTCGCGGCG CGTTATGTAA AATCACAGAT TATCCTGCGA TCGTGAAAAT TCCCCCTGTC 
GCCGTCGGCA TATTAGCCGC CGGAGGCAAT AGCCAGGCGC CTTTCCACGT CAGCCTGGAA 
TGTGAGTCCG GTGCCGTGTC CAGTGCCCTC CCGTCCACCA GCGCCGCTAA TGTCGCAATG 
GGGTTTGTCG TTAATCAACC CACCGCCGTG GCGGCGGCGC GTCGCCTGGG GCTAACCACA 
TCCGCAGGCG GTCTGTCGTG GCTACTGGAC ACCCATTATG GCGAACCTGG CGTAGCTTCC 
GGAGTGGGTA TCCGCATCTA TAACGATGCC GGTACGCCAA TTAACCTGTT ACCCGATCGG 
ATCAAGACAG GCACTGGCAA CGCCCGAGGC TGGTATGGCT ATAAAGATTT AACCACACGA 
GTATCATCCG GTTCAGTAGA AACCTACAGC GGTGATTTTA CTGCCTCGCT TGAGGCGATC 
GCCGGACAAA CAGTAACGGC AGGAAGCGTG AATGCGCAAT TACAGGCAGT GGTTAGTTTT 
CAGTAA
 
Protein sequence
MLFSFRTLLF ITSLFVSAGT WSSCIKVTNK SALSDAAIKA GYTAQNWIGA TDTNTGNIGL 
PTVISISNSE TFQPSGTLLA SGIGNFLTAA TGTPYSSKQV LYRCDSADAG KLYEMYSTNG 
DSAFAGAFFT PEVEGAYYDV ERNVAVRMTN LSTGEYYSRF WKERQLTADS WFQDDKYIYI 
PASAFSNVLY EMFKIDSRKY FAYQNPMDRD TWTQPRGYIA FKGPGLITER IKAGLDHASD 
YYGWPGYWPG AWSTYNSVTY VRGALCKITD YPAIVKIPPV AVGILAAGGN SQAPFHVSLE 
CESGAVSSAL PSTSAANVAM GFVVNQPTAV AAARRLGLTT SAGGLSWLLD THYGEPGVAS 
GVGIRIYNDA GTPINLLPDR IKTGTGNARG WYGYKDLTTR VSSGSVETYS GDFTASLEAI 
AGQTVTAGSV NAQLQAVVSF Q