Gene SeSA_A0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0287 
Symbol 
ID6519070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp298919 
End bp300094 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content56% 
IMG OID642745448 
Productinner membrane transport protein YdhP 
Protein accessionYP_002113274 
Protein GI194738242 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.699069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCTCG CTTTATTTGC ACTGACAATA AGTGCCTTCG CTATCGGTAC GACTGAGTTT 
GTGATTGTCG GCCTGGTGCC GACCATTGCA CAACAACTGG CTGTCTCGTT ACCTTCCGCC 
GGAATGCTGG TTTCAATCTA TGCGCTGGGG GTGGCTATTG GCGCGCCGGT GCTGACCGCT 
TTGACCGGAC GCCTGCCGCG TAAGCAGTTA CTGGTTGCGC TGATGGTCTT GTTTACGGTG 
GGGAATTTGC TGGCATGGCA GGCGCCGGGC TATATGACAT TAATCGCTGC CCGTTTGCTG 
ACGGGCCTGG CGCACGGCGT GTTCTTCTCG ATTGGCTCTA CCATCGCGAC AAGTCTGGTG 
CCAAAAGAGA AAGCGGCTTC TGCGATCGCT ATTATGTTTG GTGGTTTAAC GGTCGCGTTG 
GTCACGGGCG TTCCGCTGGG CACATTTATC GGTCAGCATT TTGGCTGGCG TGAGACCTTC 
CTTGCGGTAT CACTGTTAGG CGTGATTGCG CTGATGAGTA GTCAATTGCT GATCCCGGCC 
AATATCCCCG GTCGGGCGGC CGCCAGCATT CGTGACCAGG TGAAAGTACT GACTCATCCT 
CGTCTGTTGC TGATTTACGC TGTTACGGCG CTGGGCTACG GCGGGGTATT CACGGCATTC 
ACCTTTCTGG CGCCGATGAT GCAGGATCTG GCGGGATTCT CCCCGGCAGC GGTAAGCTGG 
ATCCTACTGG GGTATGGCGT ATCTGTGGCT ATCGGCAATA TCTGGGGCGG TAAACTGGCG 
GATAAGCATG GTGCCGTGCC GGCGCTGAAA TTCATTTTCG CCGCGCTGTT TGTTCTGCTG 
ATGGTCTTCC AGGTGACGGC CTCCACGCAG TATGCCGCGC TGGCTACCAT TCTGGTGATG 
GGGATCTTTG CCTTCGGTAA CGTACCGGGG TTGCAGGTCT ACGTGGTACA GAAAGCGGAA 
CAATTTACGC CCAATGCCGT TGATGTGGCG TCAGGTCTGA ACATTGCGGC GTTTAACATT 
GGTATTGCGC TGGGCTCCGT GATTGGCGGG CAAACGGTGG CGCATTACGG TTTGGCGCAG 
ACGCCGTGGA TTGGCGCCCT CATTGTTCTG GTGGCTTTCC TGCTGATGGG TGTCAGCGGA 
CGTCTTGATA AACCTGTACG CATTGCTCTG GAGTAA
 
Protein sequence
MPLALFALTI SAFAIGTTEF VIVGLVPTIA QQLAVSLPSA GMLVSIYALG VAIGAPVLTA 
LTGRLPRKQL LVALMVLFTV GNLLAWQAPG YMTLIAARLL TGLAHGVFFS IGSTIATSLV 
PKEKAASAIA IMFGGLTVAL VTGVPLGTFI GQHFGWRETF LAVSLLGVIA LMSSQLLIPA 
NIPGRAAASI RDQVKVLTHP RLLLIYAVTA LGYGGVFTAF TFLAPMMQDL AGFSPAAVSW 
ILLGYGVSVA IGNIWGGKLA DKHGAVPALK FIFAALFVLL MVFQVTASTQ YAALATILVM 
GIFAFGNVPG LQVYVVQKAE QFTPNAVDVA SGLNIAAFNI GIALGSVIGG QTVAHYGLAQ 
TPWIGALIVL VAFLLMGVSG RLDKPVRIAL E