Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0184 |
Symbol | speD |
ID | 6519788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 193097 |
End bp | 193891 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642745352 |
Product | S-adenosylmethionine decarboxylase |
Protein accession | YP_002113184 |
Protein GI | 194734260 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1586] S-adenosylmethionine decarboxylase |
TIGRFAM ID | [TIGR03331] S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.877989 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAAAGC TGAAACTGCA TGGCTTTAAC AATCTGACGA AAAGCCTGAG TTTTTGTATT TACGATATCT GCTACGCCAA AACCGCAGAA GAGCGCGATG GCTATATCGC CTATATCGAT GAACTCTATA ACGCCAACCG ACTGACCGAG ATCCTGTCGG AGACCTGCTC CATTATCGGC GCGAACATCC TGAACATCGC CCGTCAGGAT TATGAACCGC AGGGTGCCAG CGTCACGATT CTGGTGAGCG AAGAGCCGAT CGACCCGAAA CTTATCGACC AAACCGAACA TCCCGGCCCG CTGCCGGAAA CCGTGGTAGC GCACCTCGAT AAGAGCCATA TCTGTGTGCA TACCTATCCG GAAAGCCATC CGGAAGGCGG GCTTTGCACC TTTCGCGCCG ACATCGAAGT GTCAACCTGC GGGGTGATTT CACCGCTAAA AGCGCTCAAT TACCTGATCC ACCAGCTAGA GTCTGATATT GTTACCATCG ATTACCGCGT GCGCGGCTTT ACGCGCGACG TCAACGGTAT GAAGCACTTT ATCGATCATG AGATTAATTC TATTCAGAAT TTTATGTCGG AAGATATGAA GTCGCTGTAT GACATGGTGG ATGTAAACGT GTATCAGGAA AATATTTTCC ATACCAAGAT GCTGCTTAAA GAGTTCGATC TTAAGCACTA CATGTTTCAC ACCAAACCGG AAGATCTCAC TGAAACCGAA CGCCAGGAGA TCACCGCCGC GCTGTGGAAA GAGATGCGCG AGATTTACTA CGGCCGCAAT ATTTCTGCGG TCTGA
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Protein sequence | MKKLKLHGFN NLTKSLSFCI YDICYAKTAE ERDGYIAYID ELYNANRLTE ILSETCSIIG ANILNIARQD YEPQGASVTI LVSEEPIDPK LIDQTEHPGP LPETVVAHLD KSHICVHTYP ESHPEGGLCT FRADIEVSTC GVISPLKALN YLIHQLESDI VTIDYRVRGF TRDVNGMKHF IDHEINSIQN FMSEDMKSLY DMVDVNVYQE NIFHTKMLLK EFDLKHYMFH TKPEDLTETE RQEITAALWK EMREIYYGRN ISAV
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