Gene SeSA_A0177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0177 
Symbol 
ID6519648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp183730 
End bp185325 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content58% 
IMG OID642745345 
Productputative outer membrane protein 
Protein accessionYP_002113177 
Protein GI194734781 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTGC CCTTTAAACC CCATCTCATT GCCCTTGTCT GCAGTGCCGG GTTATTTGCC 
GCTTCGGGCG TACTGTATGT TAAAAGCCGC GCTCCCGAAG CGCCCGCGCA GGCGGCGGCT 
CCCGCCCCTG AGCCAACGCA GACCGCTGTG CCCGCGCCTG TCGCGAAAAC GACCTTTACC 
ACTGCGCAAA TCGATCAATG GGTCGCGCCT GTCGCGCTTT ATCCCGATGC CCTGCTTTCG 
CAGGTGCTCA TGGCCTCCAC CTACCCGGCG AACGTGGTTC AGGCCGTCCA GTGGTCGCGA 
GATAACCCCA CGCTGCAGGG CGATGCCGCT ATTCAGGCGG TGGCCAGCCA ACCGTGGGAT 
CCCAGCGTCA AATCGCTGGT CGCCTTTCCC CAGTTGATGG CGCTTATGGG CGAGAATCCG 
CAATGGGTGC AAAACCTGGG CGATGCGTTC TTAGCCCAGC CACAGGATGT GATGGATGCG 
GTACAAAGGT TGCGTCTGCT CGCTCAACAA ACCGGTTCGC TAAAATCAAC GCCGCAGCAA 
ACCGTCACCA GCGTGCCGAA GTCCAGCGCT TCTAGCGCCG TCACGACGAC AACCACCACA 
TCCGCCAGTA CGCCAGCGAC ACCGTCGACC GTCATCAAAA TTGAACCCGC GAATCCGCAG 
GTGGTGTACG TGCCGAACTA TAACCCCGCG ACGGTGTATG GCGCCTGGCC CAATACCGCT 
TATCCGCCGG TGTATTTACC GCCCCCTCCG GGACAGCAGT TTGCCGATAG TTTTGTTAAA 
GGTTTTGGTT ATAGTCTGGG CGTCGCCACC ACCTATGCGT TGTTCAGCAG CATAGACTGG 
GATGACGACG ATCATCACCA CCATGACGAC GACCATCATG ATGATGATTA CCATCATGGT 
GGTAACGGTT ATCAACACAA TGGCGATAAT ATCAATATCA ATGTCAATAA TTTCAACCGG 
ATATCCGGGC AAAACCTGCC GGGCCAAACG ATGGGCTGGC AGCATAATCC CGCCTGGCGC 
AATGGCGTCC CCTATCCGAA TAATACCGTT GCGCAACGGT TCCATCCCAC CAATGTTAGC 
GGCGGGTTAA GCGCAACGCA GCAAGCGCCA GTGTCTCGCG ACAGTCAGCG CCAGGCGGCC 
ATGACGCAAT TCCAACAGCG CAGCCATACA GCGAACGCTT CTTTGCCAGC GCCAGGCACC 
CGCGATGCCC AGCGTAAAGC GGCCTCACAA CAATTAAATC AGATAGCCCG GCGTAATAAT 
TATCGCGGTT ATGACAATCA GTATGACAGC GCGCGTCGAC AGACGGCGCA GCAGCATAGC 
GCGACGCTGA AATCCCAGAC GCAGCAGCAT CCCTTATCGC AGCAACAGCG TAACGCGGCG 
CATCAGCGGA TCGCATCCTC TACGCCGCAG CAGCGTCAGG CATTTCGCCA GAATATGCAC 
GCCAATGTGT TTAGCGGGAA CGACAGTCGA TCGCCGTCAT GGCAATCGCA ACAGCTACGC 
GGCCTGGAAA GCCGTCGCGG CAGCCACTTA AACACCGAGC AACACGCCGC CGCGCGGGAA 
CATTTTTCTG AACATCATGA ATTTCATCGC CGTTAA
 
Protein sequence
MTLPFKPHLI ALVCSAGLFA ASGVLYVKSR APEAPAQAAA PAPEPTQTAV PAPVAKTTFT 
TAQIDQWVAP VALYPDALLS QVLMASTYPA NVVQAVQWSR DNPTLQGDAA IQAVASQPWD 
PSVKSLVAFP QLMALMGENP QWVQNLGDAF LAQPQDVMDA VQRLRLLAQQ TGSLKSTPQQ 
TVTSVPKSSA SSAVTTTTTT SASTPATPST VIKIEPANPQ VVYVPNYNPA TVYGAWPNTA 
YPPVYLPPPP GQQFADSFVK GFGYSLGVAT TYALFSSIDW DDDDHHHHDD DHHDDDYHHG 
GNGYQHNGDN ININVNNFNR ISGQNLPGQT MGWQHNPAWR NGVPYPNNTV AQRFHPTNVS 
GGLSATQQAP VSRDSQRQAA MTQFQQRSHT ANASLPAPGT RDAQRKAASQ QLNQIARRNN 
YRGYDNQYDS ARRQTAQQHS ATLKSQTQQH PLSQQQRNAA HQRIASSTPQ QRQAFRQNMH 
ANVFSGNDSR SPSWQSQQLR GLESRRGSHL NTEQHAAARE HFSEHHEFHR R