Gene SeHA_C4981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4981 
Symbol 
ID6489433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4860235 
End bp4860942 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content46% 
IMG OID642745024 
Productputative periplasmic chaperone protein 
Protein accessionYP_002048593 
Protein GI194449474 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3121] P pilus assembly protein, chaperone PapD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCAG TGACTAAACT TCCATTATTA TTACTCAGCG TCCCCTTTGT TTTTTCAACA 
CTCTTTTCAC AGGCTAACGC TGCCGGCATG GTACCGGAAA CTACGCTACT GGTGATTGAA
GAATCCACAC ACAGCGGCGT AATGAATGTT AAAAACACCG ACAGCAATCC GGCTTTGTTA
TATACCACCG TCGTTGATTT ACCTGACGAC AATGGTGTGA AACTGGATGT CACTCAACCA
GTTGTTCGCG TTGAAGCAGG CCAGCAGCAG CAACTACGCT TTATTATGGA AAGTACGGAA
CCGCTCACCG TCGAGCACTA TAAGCGCGTC ACGTTTGAAG GTATTCCTCC GAAATCTACC
GATAAAGGAA TGAAAATAGG TTTTAATCTA CGCCAGGATT TGCCGGTATT AATTCGTCCT
AAAAATCTAC CGGTCGTTAC TGATGCCTGG AAATTATTAA CCTGGTCCAG AAACGGACAA
ACAATCAACG TCAAAAATCC GTCTCCCTAC GTTGTACGTT TAGCCCAAAA TATTACCTTC
TTACCTTCCG GGGGCGAAGG CACGATTAAA AAAACCTATA TTCTGCCCGG CGAAACATTG
AACGTCAGTA TAAAAACGCC CTTTGCTGCT GATACATCCG TACGTTTTTA TCCTGCCAGC
CGTTACGGCA TTGAAGTCCC CAGCTTTACC TCACCGCTGG TGCCGTAA
 
Protein sequence
MPAVTKLPLL LLSVPFVFST LFSQANAAGM VPETTLLVIE ESTHSGVMNV KNTDSNPALL 
YTTVVDLPDD NGVKLDVTQP VVRVEAGQQQ QLRFIMESTE PLTVEHYKRV TFEGIPPKST
DKGMKIGFNL RQDLPVLIRP KNLPVVTDAW KLLTWSRNGQ TINVKNPSPY VVRLAQNITF
LPSGGEGTIK KTYILPGETL NVSIKTPFAA DTSVRFYPAS RYGIEVPSFT SPLVP