Gene SeHA_C4920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4920 
Symbol 
ID6490622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp4800629 
End bp4801813 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content56% 
IMG OID642744965 
Productmajor facilitator family transporter 
Protein accessionYP_002048537 
Protein GI194451634 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.177935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCATG CTCAGAGCGC TTCACCTCGC CATCCCATTT TTACGGCGCT TTTCGGTATG 
ATGGTATTGA CGCTGGGGAT GGGAGTTGGC CGCTTTCTGT ATACGCCCAT GCTGCCGGTA 
ATGCTGGCGG AAAAGCAGCT AACGTTTAAC CAACTCTCCT GGATTGCCAG CGCCAATTAT 
GCAGGGTACC TGGCGGGAAG CTTACTGTTT TCCTTTGGCC TTTTTCATCT CCCCTCTCGT 
CTACGCCCCA TGCTGCTGGC TTCGGCGGTC GCCACCGGTA TTCTTATTCT GTCTATGGCG 
ATATTTACTC AGCCCGCGGT CGTCATGTTG GTGCGCTTCC TGGCAGGCGT CGCGAGTGCG 
GGAATGATGA TTTTTGGATC AATGATTGTG TTGCATCATA CCCGCCATCC GTTTGTGATC 
GCCGCGCTCT TTTCCGGCGT CGGGGCCGGG ATTGCACTGG GCAACGAATA TGTCATTGGC 
GGTTTACATT ATGCGCTTTC GGCCCATTCG CTATGGCTGG GGGCCGGGGC GCTCGCCGGT 
ATATTGCTAT TAATCGTGGC AATATTGATT CCCCCCCGCG CTCATGCGCT GCCGCCTGCG 
CCCTTAGCAA GAATCGAAAA TCAGCCTATG CCCTGGTGGC AACTGGCGCT GTTGTACGGT 
TTCGCCGGAT TCGGCTACAT CATTGTCGCT ACCTATTTGC CGCTGATGGC GAAAAGCGCG 
GGCTCTCCGC TACTCACGGC GCACCTTTGG TCGTTGGTCG GCCTGGCGAT CATTCCCGGC 
TGCTTCGGCT GGCTGTGGGC GGCAAAACAT TGGGGCGTCC TGCCATGCCT GACCGCGAAC 
CTGTTGATCC AGAGCGCCTG CGTGCTGCTG TCTCTCGCCA GCGACTCATT GTTGCTGTTA 
ATACTGAGCA GTATTGGTTT TGGCGCCACG TTTATGGGCA CAACCTCGCT GGTGATGCCG 
CTTGCCCGAC AACTCAGCGC GCCGGGTAAT ATTAATTTGT TAGGCCTGGT GACGCTAACG 
TATGGTATTG GGCAAATTCT CGGTCCGCTC GCCGCCAGTC TGTCAGGCAA TGGCGCGTCG 
GCAATTATCA ACGCCACGCT TTGCGGCGCC GCGGCGCTCT TTTTTGCCGC GCTGATCAGC 
GCCGCGCAGC AGATAAAACA AAAACGGTTT GTGATACGTG AATAA
 
Protein sequence
MVHAQSASPR HPIFTALFGM MVLTLGMGVG RFLYTPMLPV MLAEKQLTFN QLSWIASANY 
AGYLAGSLLF SFGLFHLPSR LRPMLLASAV ATGILILSMA IFTQPAVVML VRFLAGVASA 
GMMIFGSMIV LHHTRHPFVI AALFSGVGAG IALGNEYVIG GLHYALSAHS LWLGAGALAG 
ILLLIVAILI PPRAHALPPA PLARIENQPM PWWQLALLYG FAGFGYIIVA TYLPLMAKSA 
GSPLLTAHLW SLVGLAIIPG CFGWLWAAKH WGVLPCLTAN LLIQSACVLL SLASDSLLLL 
ILSSIGFGAT FMGTTSLVMP LARQLSAPGN INLLGLVTLT YGIGQILGPL AASLSGNGAS 
AIINATLCGA AALFFAALIS AAQQIKQKRF VIRE