Gene SeHA_C4795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4795 
Symbol 
ID6489070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp4673554 
End bp4675176 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content57% 
IMG OID642744846 
Productisovaleryl CoA dehydrogenase 
Protein accessionYP_002048419 
Protein GI194448363 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0438512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTGGC AAACACATAC CGTCTTTAAT CAACCTGCTC CGCTCAATAA CAGTAACTTA 
TTCCTGTCTG ATGGCGCGCT GTGTGAAGCG GTTTCCCGGG AAGGCGCGGG ATGGGATAGC 
GATCTTCTCG CCAGCATTGG CCAACAACTG GGAACGGCAG AATCACTGGA ACTGGGGCGT 
CTGGCGAACG CGCATCCTCC TGAGTTGCTA CGTTACGATC CCCAGGGACA GCGTCTGGAT 
GACGTTCGCT TTCATCCCGC CTGGCACCTG TTGATGCAGG GGCTTTGCGC TAATCGGGTA 
CATAACCTGG CCTGGGAGGA AGAGGCAAGG GCGGGAAGTT TTGTCGCCCG GGCGGCGCGT 
TTTGTATTAC ATGCTCAGGT AGAAGCGGGA ACACTCTGTC CTGTCACGAT GACCTTTGCC 
GCGACACCGT TGCTATTGCA GATGCTTCCC ACCACTTTCC ATGACTGGCT GGCGCCGCTG 
CGCAGCGATC GCTACGATTC GCATTTGCTG CCGGGCGGGC AAAAACGGGG CCTGCTCATC 
GGCATGGGAA TGACGGAAAA GCAGGGCGGA TCTGACGTAC TCAGTAATAC GACCCACGCG 
GAGCGGCTGG CGGATGATTC ATATCGGCTG GTGGGACATA AATGGTTTTT CTCTGTGCCG 
CAAAGCGATG CGCACCTCGT GCTGGCGCAG GCAAAAGGAG GACTATCCTG TTTCTTTGTG 
CCGCGTTTCC TACCAGACGG GCAACGGAAC TCTGTTCGTC TTGAACGCCT GAAAGATAAA 
CTCGGTAATC GATCTAATGC CAGCGCCGAA GTCGAGTTTC AGGATGCTAT CGGCTGGCGG 
CTGGGAGAAG AGGGCGAAGG GATTCGGCAT ATCTTAAAGA TGGGCGGTAT GACGCGTCTT 
GACTGCGCGC TTGGGAGTCA TGGCTTAATG CGGCGCGCGT TTTCAGTCGC CATTTACCAT 
GCTCATCAGC GTCAGGCTTT TGGTAAGCCG CTGATCGATC AACCGTTGAT GCGACAAACC 
TTAAGTCGTA TGGCGCTATG CCTGGAAGGG CAGACGGCGC TGTTGTTTCG GCTGGCGCGC 
GCCTGGGAGC AACGTCGCGA GGCGAAAGAG GCATTATGGG CGCGATTATT CACGCCAGCG 
GCGAAATTCG CCATCTGTAA GCAGGGAATC CCTTTTGTGG CTGAGGCGAT GGAGGTTCTC 
GGCGGGATGG GGTATTGCGA AGAGTGCGAA CTCCCGCGCC TGTACCGTGA AATGCCGGTG 
AACAGTATCT GGGAAGGTTC CGGCAATATC ATGTGTCTGG ATGTACTTCG GGGGCTGACA 
AAACAACACG GCGTCTATGA CGTATTGAGT GAAGCTTTTG CGGAAGTCAA AGGTCAGGAT 
CGCCATTACG ACCGCGCGGT ACGTCAGCTA CAGCAACGTT TACGCAAACC GGACGAAGCA 
ATGGGCAGAG AGATTACGCA GCAGCTTTTC TTGCTGGGGT GCGGAGCGGA AATGCTGCGT 
CATGCCTCGC CGCCGCTGGC GCAAGCGTGG TGTCAGATGA TGCTGGATAC ACGCGGCGAA 
ATGCCGCTGC CTGCCCAGGT GCAAAATGAT TTACTGTTAA GGGCGACCGG GGGACTGCGG 
TAA
 
Protein sequence
MSWQTHTVFN QPAPLNNSNL FLSDGALCEA VSREGAGWDS DLLASIGQQL GTAESLELGR 
LANAHPPELL RYDPQGQRLD DVRFHPAWHL LMQGLCANRV HNLAWEEEAR AGSFVARAAR 
FVLHAQVEAG TLCPVTMTFA ATPLLLQMLP TTFHDWLAPL RSDRYDSHLL PGGQKRGLLI 
GMGMTEKQGG SDVLSNTTHA ERLADDSYRL VGHKWFFSVP QSDAHLVLAQ AKGGLSCFFV 
PRFLPDGQRN SVRLERLKDK LGNRSNASAE VEFQDAIGWR LGEEGEGIRH ILKMGGMTRL 
DCALGSHGLM RRAFSVAIYH AHQRQAFGKP LIDQPLMRQT LSRMALCLEG QTALLFRLAR 
AWEQRREAKE ALWARLFTPA AKFAICKQGI PFVAEAMEVL GGMGYCEECE LPRLYREMPV 
NSIWEGSGNI MCLDVLRGLT KQHGVYDVLS EAFAEVKGQD RHYDRAVRQL QQRLRKPDEA 
MGREITQQLF LLGCGAEMLR HASPPLAQAW CQMMLDTRGE MPLPAQVQND LLLRATGGLR