| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C4789 |
|---|
| Symbol | |
|---|
| ID | 6491668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 4668815 |
|---|
| End bp | 4669513 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642744841 |
|---|
| Product | PspA/IM30 family protein |
|---|
| Protein accession | YP_002048414 |
|---|
| Protein GI | 194449074 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATTT TAAAAAGTTT GTTCACGTTA GGTAAATCAT TCGTTGCTCA GGCAGAAGAC
GCCATTGATG AAGCGCAGGG TGTACGTATG CTGGAGCAGC ATATTCGCGA CGCAAAAGCC
GAGCTGGATA AAGCGGGTAA ATCCAGAGTG GATTTATTGG CGCGGGTGAA GTTAAGCCAT
GACAAGCTGA ATGATTTACG TGAGCGTAAA GCCAGCCTTG AAACACGGGC GTTGGCGGCA
ATGAGTAAGA ATGTCGACGC CGCTTTACTC AACGAAGTGG CGGAAGAAAT AGCCCGTCTG
GAAAATGCCA TTCTTGCCGA AGAACAGGTG CTGACTAATC TGGAAGCCTC TCGCGATGCG
GTGGAGAAGG CCGTAACGGC GACAGGCCAG CGGATTGCGC AGTTTGAGCA GCAACTTGAA
GTGGTTAAGG CGACAGAAGC CATGCAGCGC GCGCAGCAGG CGGTGACGAC TTCGACCGTC
GGAGCCGCGT CGAATGTGTC TACGGCGGCG GAGTCGCTTA AACGTTTACA AACGCGTCAG
GCTGAACGCC AGGCCCGGCT GGATGCCGCC GCGCAGCTGG AAAAAGTCGC CGATGGACGC
GACCTGGATG AAAAACTGGC GCAGGCGGGT ATTGGCGCAA CCAATAAAAG CAATGCTCAG
GATGTGTTGG CGCGTTTACA GCGTCAACAA GGCGAATAA
|
|---|
| Protein sequence | MGILKSLFTL GKSFVAQAED AIDEAQGVRM LEQHIRDAKA ELDKAGKSRV DLLARVKLSH
DKLNDLRERK ASLETRALAA MSKNVDAALL NEVAEEIARL ENAILAEEQV LTNLEASRDA
VEKAVTATGQ RIAQFEQQLE VVKATEAMQR AQQAVTTSTV GAASNVSTAA ESLKRLQTRQ
AERQARLDAA AQLEKVADGR DLDEKLAQAG IGATNKSNAQ DVLARLQRQQ GE
|
|---|
| |