Gene SeHA_C4552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4552 
Symbol 
ID6490652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4429390 
End bp4429914 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content44% 
IMG OID642744624 
Productphage major tail tube protein 
Protein accessionYP_002048201 
Protein GI194447617 
COG category[R] General function prediction only 
COG ID[COG3498] Phage tail tube protein FII 
TIGRFAM ID[TIGR01611] phage contractile tail tube protein, P2 family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.845098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value0.36933 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGAA AAATTCAAAT TAACCGTATT ACCAACGCCA ATATTTATCT TGATGGTAAT 
AATCTTTTAG GTCGCGCGAG TGAAATTAAA CTGCCTGATA TCAGCATGAT TATGCAGGAG
CATAAAGCGC TGGGGATGGT CGGTAAAATT GAACTGCCTG CCGGTTTTGA CAAACTGGAA
GGTGAAATTA AATGGAACTC GTTTTACCAC GACGTCATGC GTAAAACGGC AAATCCGTGG
CAGGCGGTGG CATTGCAGTG CCGCTCCAGC ATCGATTGTT ATAACTCGCA GAGTAAAGCG
GATCAGTTAG CGCTGGTGAC GCATATGACC GTAATGTTTA AAAAGAACCC GCTGGGAACG
TTTAAACAGA ATGAAAACCC GGAATTCAGC AGCGCCTTCG GCTGCACTTA TATTAAACAG
GTGGTTGACG GTGAAACGCT TCTTGAACTG GATTATCTGG CGAATATTTT CCGCGTAAAT
GGCGCGGATC AATTAAATGC CTACCGCAAT AATATTGGCG GTTAA
 
Protein sequence
MAGKIQINRI TNANIYLDGN NLLGRASEIK LPDISMIMQE HKALGMVGKI ELPAGFDKLE 
GEIKWNSFYH DVMRKTANPW QAVALQCRSS IDCYNSQSKA DQLALVTHMT VMFKKNPLGT
FKQNENPEFS SAFGCTYIKQ VVDGETLLEL DYLANIFRVN GADQLNAYRN NIGG