Gene SeHA_C4018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4018 
SymbollldD 
ID6491780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3901347 
End bp3902537 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content60% 
IMG OID642744119 
ProductL-lactate dehydrogenase 
Protein accessionYP_002047724 
Protein GI194447309 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATTT CAGCAGCCAG CGATTATCGC GCCGCAGCTC AGCGCACGTT GCCTCCTTTC 
CTCTTCCACT ACATCGACGG CGGCGCGTAT GCGGAATATA CCCTGCGCCG AAATGTGGAA
GACCTGTCGC AAGTCGCTCT GCGCCAGCGC GTGCTGAAAA ATATGTCCGA TTTAAGCCTG
GAAACGACCC TGTTTAACGA AACGTTGTCG ATGCCGGTGG CATTAGCGCC GGTAGGCCTG
TGCGGCATGT ACGCCCGTCG CGGCGAAGTA CAGGCCGCCG CCGCCGCAGA CGCAAAGGGC
ATTCCGTTCA CCCTTTCCAC CGTCTCCGTC TGTCCGATAG AAGAAGTTGC ACCAACCATT
CAGCGCCCGA TGTGGTTCCA GCTTTATGTG CTGCGTGACC GGGGCTTTAT GCGCAACGCG
CTTGAACGTG CGAAAGCGGC GGGCTGCTCC ACGCTGGTCT TTACCGTGGA TATGCCGACG
CCGGGCGCGC GCTACCGTGA CGCCCACTCC GGGATGAGCG GCCCAAACGC GGCCATGCGC
CGTTACTGGC AGGCGGTGAT GCACCCTAAA TGGGCGTGGG ATGTCGGCCT GAACGGTCGC
CCGCATGATT TAGGCAATAT TTCCGCCTAT CTGGGTAAAC CGACCGGCCT TGAGGACTAT
ATCGGCTGGC TGGCAAATAA CTTCGATCCG TCCATCTCCT GGAAAGATCT GGAGTGGATA
CGCGAATTCT GGGACGGCCC AATGGTGATC AAAGGGATCC TCGATCCAGA AGATGCCCGC
GATGCGGTAC GTTTCGGCGC TGACGGTATC GTGGTGTCGA ATCACGGCGG CCGCCAGCTC
GATGGCGTGC TCTCTTCCGC CCGCGCCCTG CCCGCCATTG CCGATGCGGT GAAAGGCGAT
ATCGCCATTC TGGCGGATAG CGGGATTCGT AACGGGCTGG ATGTCGTGCG TATGATTGCG
TTGGGGGCCG ATACCGTACT GCTGGGTCGG GCCTATCTCT ACGCGCTGGC GACGGCAGGA
AAAGCGGGGG TCGCCAACTT GCTGGACCTG ATCGAAAAAG AGATGAAAGT CGCCATGACC
CTGACCGGCG CGAAATCCAT TAGCGAAATC AGTGGCGATT CACTGGTGCA GGAACTGGGG
AGAAGTTTGC CCGCTGCGCT GGCGCCAATG AGCAAAGGCG ATGCCGCCTG A
 
Protein sequence
MIISAASDYR AAAQRTLPPF LFHYIDGGAY AEYTLRRNVE DLSQVALRQR VLKNMSDLSL 
ETTLFNETLS MPVALAPVGL CGMYARRGEV QAAAAADAKG IPFTLSTVSV CPIEEVAPTI
QRPMWFQLYV LRDRGFMRNA LERAKAAGCS TLVFTVDMPT PGARYRDAHS GMSGPNAAMR
RYWQAVMHPK WAWDVGLNGR PHDLGNISAY LGKPTGLEDY IGWLANNFDP SISWKDLEWI
REFWDGPMVI KGILDPEDAR DAVRFGADGI VVSNHGGRQL DGVLSSARAL PAIADAVKGD
IAILADSGIR NGLDVVRMIA LGADTVLLGR AYLYALATAG KAGVANLLDL IEKEMKVAMT
LTGAKSISEI SGDSLVQELG RSLPAALAPM SKGDAA