Gene SeHA_C3954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3954 
Symbol 
ID6490166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp3832348 
End bp3833355 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content60% 
IMG OID642744058 
Productregulatory protein LacI 
Protein accessionYP_002047664 
Protein GI194450843 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.226118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTTC AAAATAAAAA ACGCGCAAAG TTGATTGATG TTGCCCGCCA TGCAGGCGTG 
TCGCCAGGGA CGGTATCCAA TGCCTTGCAC AACACCCGCT TTGTCGAGCC GCAGACGCGA 
CGGCGTATTG AAGAGGCCAT TGTTGCGCTC AACTACACGC CGAATATTCG CGCTCGCCAG 
TTACGAACCG GCAAAACCAA TACCATTGCT TTGCTCTCTT CGGTGCCGCT GGCGATTGCC 
TCCGGCGCAT CACGACTGGG ATTTATGATG GAGGTGGCGT TAACGTCCGC GATGATGGCG 
CTGGAAAAGC AGCATGCGCT GATTCTGGTG CCGCCGGGGG CAAATCCACT GGATGCCGTC 
AGCTTTGACG CGGCGATCCT GATTGAACCG GCGGAGAACG ACCCGCAGCT CCAGGCGCTG 
GCGCAAGCGG GCATTCCCTG CGTCACCATT GGCCGCACGC CGGGGACCGA CACGCCTGTG 
CCGTGGGTGG AGCTGCACTC GGCGGCAACA GCACAACTTC TGTTAACGCA TCTGGAGGCC 
TCCGGTGCCA GCAAATGTGC GTTATTTGTC GGTAACACAC GGCGAACATC AGTTCTGGAG 
AGCGAAGCGG CTTACCAGCG CTGGTGCGCG GGGCGCCAGG CCCCCGTCGT CTACTCTCTC 
AATGAAAGCG AGGGTGAAAA TGCCGGCTAC CAGGCCGCGC AGCAGCTATT ACAGGCGCAT 
CCCGACGTTG ACGGCGTGCT GGTGCTGATC GATACCTTTG CCAGCGGCGC GGTACGCGCT 
TTCCAGGAAC AAGACATCGC CATACCTGAA CAAATGCGGG TGGTTACTCG CTATGACGGT 
ATCCGCGCGC GCGAATCGCT GCCGCCGCTG ACGGCAGTGA ATATGCATCT TGATGAGGTG 
GCGCGACAGG CAATCACGCT CCTGTTTGCC GTTCTGTCGG GTGAGAAGGT CAGCTACAGC 
GACGGGATCA TGCCTGAACT GGTGGTGCGA GCGTCAACCT GCCGGTGA
 
Protein sequence
MAVQNKKRAK LIDVARHAGV SPGTVSNALH NTRFVEPQTR RRIEEAIVAL NYTPNIRARQ 
LRTGKTNTIA LLSSVPLAIA SGASRLGFMM EVALTSAMMA LEKQHALILV PPGANPLDAV 
SFDAAILIEP AENDPQLQAL AQAGIPCVTI GRTPGTDTPV PWVELHSAAT AQLLLTHLEA 
SGASKCALFV GNTRRTSVLE SEAAYQRWCA GRQAPVVYSL NESEGENAGY QAAQQLLQAH 
PDVDGVLVLI DTFASGAVRA FQEQDIAIPE QMRVVTRYDG IRARESLPPL TAVNMHLDEV 
ARQAITLLFA VLSGEKVSYS DGIMPELVVR ASTCR