Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3926 |
Symbol | |
ID | 6490828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 3797531 |
End bp | 3799591 |
Gene Length | 2061 bp |
Protein Length | 686 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642744033 |
Product | AsmA family protein |
Protein accession | YP_002047639 |
Protein GI | 194449561 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 94 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTAAAG CAGGCAAAAT AACCGCCGCC ATCACAGGGA CTTTCTTGTT GTTGATCGCC ATAGTGATTT TGTTGATCGC AACATTTGAC TGGAACCGCC TCAAACCGAC CATCAACCAG AAAGTCTCTA CCGAATTGAA CCGGCCTTTC GCTATTCGCG GCGATTTAGG CGTGGTGTGG GAACGCCAAA AACAGGAGAC CGGCTGGCGA AGCTGGGTAC CGTGGCCGCA TGTTCACGCG GAAGACGTCA TTCTCGGCAA TCCGCCGGAT ATTCCGGAAG TTACGATGGT GCATCTGCCA CGCGTTGAGG CGACGCTTGC CCCGCTGGCG CTCCTGACCA AAACCGTCTG GCTGCCGTGG ATCAAACTGG TGAAACCCGA CGCGCGTCTT ATTCGTCTGT CCGAGAAAAC CAATAACTGG ACCTTTAACC TCACGCAAGA CAAGAATACG GACCCCAATG CTAAACCTTC CGCCTGGTCC TTCCGGCTGG ATAATATTCT CTTCGACCAG GGGCGAATCG CGATCGATGA TAAGGTCAGT AAAGCGGATA TCACTATTCT GGTCGATCCG TTAGGCAAAC CGTTGCCGTT CAGCGAAGTG ACGGGAACGA AAGGCAAAGC AGACAAATCC ACCGTGGGCG ACTATGTCTT CGGCCTGAAG GCGCAGGGGC GTTATAACGG GGAACCGTTG ACCGGTACGG GGAAAATAGG CGGTATGCTG GCGCTACGCA GCGAAAGTAC GCCTTTTCCT GTGCAGGCCG ATTTCCGCTC TGGTAATACG CGGGTGGCTT TTAGCGGCGT GGTGAACGAA CCGATGAAAA TGGGCGGCGT CGATCTGCGG CTTAAATTCT CTGGCGATTC ACTGGGCGAT TTATATGATT TAACCGGCGT GCTGCTGCCG GATACGCCGC CGTTTGAGAC CGATGGGCGA TTGGTGGCGA AAATTGACGC CGAAAAGTCA TCAGTATTTG ATTATCGCGG TTTTAACGGG CGCATTGGCG ACAGTGATAT CCACGGCTCC CTCACTTATA CCACCGGTAA ACCGCGCCCT AAACTGGAAG GCGATGTCGA ATCGCGCCAG TTACGCCTGG CCGATCTTGG GCCGCTGATT GGCGTGGATT CCGGGAAAGA CGCTGAGCAG TCGAAACGGT CTGAACAGCG CAAAGGCGAG AAGAATGTTC AGCCGGCGGA TAAAGTGTTG CCTTACGATC GCTTTGAAAC CGACAAATGG GACGTTATGG ACGCCGATGT CCGGTTTAAA GGCCGACGTA TTGAACATGG CGGCAGTCTA CCGATTAGCG ATCTTTCGAC CCATATCATC CTGAAAAACG CCGACTTACG TCTACAGCCG CTGAAGTTTG GTCTGGCAGG CGGCAGTATT GTCTCCAACA TCCATCTGGA AGGGGATAAA AAGCCAATGC AGGGGCGGGC GGATATACAG GCGCGTCGGC TGAAGCTTAA AGAACTGATG CCGGATGTGG AGCTGATGCA GAAAACGCTG GGCGAGCTGA ACGGCGATGC GGATATTCGC GGGACGGGCA ACTCGGTCGC CGCGCTGCTT GGCAACAGTA ACGGCAATCT CAAATTATTG ATGAATGATG GATTGATTAG CCGCAACCTG ATGGAAATCG TGGGGCTGAA CGTCGGCAAC TATATTGTCG GGCAGATTTT TGGCGATGAC GAAGTGCGGG TTAACTGCGC GGCGGCGAAT CTCAATATTG CGAACGGCGT GGCGCGACCG CAAATTTTTG CTTTTGATAC AGAAAATGCG TTGATTAACG TGACCGGTAC GGCGAGCTTC GCCTCTGAAC AGCTCGATTT AACCATTGAT CCGGAAAGTA AGGGGATTCG TATTATTACG CTGCGATCGC CGCTGTACGT GCGCGGGACA TTTAAAAATC CGCAGGCGGG CGTCAAGCCC GGCCCGCTGA TTGCGCGCGG CGCGGTTGCG GCAGCGCTGG CGACGTTGGT AACGCCCGCC GCCGCGCTAT TGGCGCTCAT TTCGCCCTCT GAAGGCGAAG CCAATCAGTG CCGGACGATT TTAACGCAGA TGAAGCAGTA A
|
Protein sequence | MTKAGKITAA ITGTFLLLIA IVILLIATFD WNRLKPTINQ KVSTELNRPF AIRGDLGVVW ERQKQETGWR SWVPWPHVHA EDVILGNPPD IPEVTMVHLP RVEATLAPLA LLTKTVWLPW IKLVKPDARL IRLSEKTNNW TFNLTQDKNT DPNAKPSAWS FRLDNILFDQ GRIAIDDKVS KADITILVDP LGKPLPFSEV TGTKGKADKS TVGDYVFGLK AQGRYNGEPL TGTGKIGGML ALRSESTPFP VQADFRSGNT RVAFSGVVNE PMKMGGVDLR LKFSGDSLGD LYDLTGVLLP DTPPFETDGR LVAKIDAEKS SVFDYRGFNG RIGDSDIHGS LTYTTGKPRP KLEGDVESRQ LRLADLGPLI GVDSGKDAEQ SKRSEQRKGE KNVQPADKVL PYDRFETDKW DVMDADVRFK GRRIEHGGSL PISDLSTHII LKNADLRLQP LKFGLAGGSI VSNIHLEGDK KPMQGRADIQ ARRLKLKELM PDVELMQKTL GELNGDADIR GTGNSVAALL GNSNGNLKLL MNDGLISRNL MEIVGLNVGN YIVGQIFGDD EVRVNCAAAN LNIANGVARP QIFAFDTENA LINVTGTASF ASEQLDLTID PESKGIRIIT LRSPLYVRGT FKNPQAGVKP GPLIARGAVA AALATLVTPA AALLALISPS EGEANQCRTI LTQMKQ
|
| |