Gene SeHA_C3843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3843 
Symbol 
ID6490177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3712315 
End bp3714762 
Gene Length2448 bp 
Protein Length815 aa 
Translation table11 
GC content52% 
IMG OID642743952 
Productglycogen phosphorylase 
Protein accessionYP_002047558 
Protein GI194450706 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0058] Glucan phosphorylase 
TIGRFAM ID[TIGR02093] glycogen/starch/alpha-glucan phosphorylases 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.400184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.614217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCTC CGTTTACTTA TGCATCGCCC ACTCTCAGCG TTGAGGCGCT TAAGCATTCT 
ATTGCCTATA AGCTGATGTT TACGATTGGT AAAGACCCGG TCATTGCCAA TAAACACGAA
TGGCTGAACG CCACGTTGTT CGCGGTGCGC GATCGTCTGG TGGAGCGCTG GCTGCGTTCT
AATCGAGCCC AATTATCGCA GGAAACCCGG CAGGTTTATT ACCTGTCGAT GGAGTTTTTG
ATTGGTCGTA CTCTCTCTAA CGCGCTGCTC TCGTTGGGCA TTTATGACGA CGTTAAAGGC
GCACTGGAGG CCATGGGCTT AGATCTCGAA GAGCTGATCG ATGAAGAGAA TGACCCAGGG
CTTGGCAACG GCGGCTTAGG ACGGCTGGCG GCTTGCTTCC TGGACTCGCT GGCGACGCTA
GGATTACCGG GCCGCGGGTA CGGCATTCGC TACGATTACG GCATGTTTAA GCAGAATATT
GTCGACGGGC GGCAAAAAGA GTCTCCGGAT TACTGGCTGG AATATGGCAA CCCGTGGGAG
TTCAAGCGCC ACAATACGCG CTATAAGGTG CTTTTTGGCG GGCGCATTCA GCAGGAAGGT
AAAAAAGCGC GCTGGATTGA GACGGAAGAG ATTCTGGCCG TCGCGTATGA TCAGATCATC
CCCGGTTACG ACACCGACGC CACTAACACA CTGCGGCTGT GGAATGCGCA GGCCAGTAGT
GAAATCAACC TCGGTAAATT CAACCAGGGC GACTACTTTG CGGCGGTGGA AGATAAAAAC
CACTCTGAGA ACGTTTCACG GGTGCTCTAT CCGGACGATT CCACCTATTC CGGACGAGAG
CTACGCCTGC GCCAGGAGTA TTTTCTGGTC TCGGCGACGG TACAGGATAT CCTGCACCGT
CATTATCAAC TGCATAAAAC CTATGAGAAT CTGGCGGATA AAATCGCCAT TCACCTCAAT
GATACGCATC CGGTGCTGTC AATTCCTGAG CTGATGCGCC TGCTGATTGA TGAACATAAA
TTTAGCTGGG ACGACGCGTT TGAGGTGTGC TGTCAGGTCT TCTCTTATAC CAACCATACG
TTGATGAGCG AGGCGCTGGA GACCTGGCCT GTCGATATGC TGGGGAAAAT TCTGCCCCGT
CACCTGCAGA TTATCTTCGA GATTAACGAC TATTTCCTGA AAACGGTGCA GGAGCAATAT
CCCAACGATA CCAGCCTGCT TGGACGCGCG TCGATTATTG ATGAGTCGAA CGGTCGCCGG
GTACGGATGG CCTGGCTGGC GGTGGTGGTC AGCCATAAAG TCAACGGCGT TTCTGAACTC
CATTCCAACC TGATGGTGCA GTCGCTGTTC GCGGATTTTG CGAAGATTTT CCCGACCCGT
TTTTGTAACG TCACTAACGG CGTTACGCCG CGCCGCTGGC TGGCGCTGGC AAACCCGCCG
CTTTCTGACG TGCTGGATGA GAATATTGGT CGTACCTGGC GTACCGATCT TAGCCAGCTC
AGCGAGCTGA AGCAGCATTG TGATTATCCG CTGGTCAATC ATGCGGTGCG TCAGGCGAAG
CTGGAAAATA AAAAACGGCT GGCGGTAGTG ATAGCGCAAC AACTGAATGT GGTGGTGAAC
CCTAAAGCGT TATTCGACGT GCAGATTAAG CGTATTCACG AATACAAGCG GCAGTTGATG
AATGTACTGC ATGTCATTAC CCGCTATAAC CGCATTAAAG AAAATCCGGA GGCCGACTGG
GTGCCGCGGG TGAATATTTT TGCCGGTAAG GCGGCTTCCG CCTATTACAT GGCAAAACAC
ATTATTCATC TGATCAACGA CGTGGCGAAA GTGATTAACA ACGATCCGCA GATTGGCGAC
AAGCTGAAAG TAGTGTTTAT CCCGAACTAC AGCGTCAGCC TGGCGCAGGT GATCATTCCC
GCTGCCGACC TGTCTGAGCA GATTTCGCTG GCAGGGACAG AAGCTTCCGG CACCAGTAAT
ATGAAATTTG CCCTGAACGG CGCGCTCACC ATTGGTACGC TGGATGGCGC GAACGTAGAG
ATGCAGGAGC ATATCGGCGA GGAGAATATC TTTATCTTCG GTAATACTGC CGAAGAGGTG
GAAGCGTTGC GCAGGCAGGG TTATAAGCCT CGCGACTATT ATGAAAAAGA TGAAGAGCTA
CATCAGGTAC TGACGCAGAT TGGTAGCGGC GTCTTTAATC CGGAAGAGCC AGGCCGTTAC
CGCGATCTGG TAGATTCGCT GATTAACTTT GGCGATCACT ATCAGGTGCT GGCGGACTAC
CGCAGCTACG TGGACTGCCA GGATAAGGTG GATGAGTTGT ATCGTCGCCC GGAAGAATGG
ACGACGAAAG CGATGCTCAA CATTGCCAAT ATGGGCTACT TCTCATCGGA CAGAACCATC
AAAGAGTATG CCGAAAATAT CTGGCATATT GATCCGGTGC GGTTGTAG
 
Protein sequence
MNAPFTYASP TLSVEALKHS IAYKLMFTIG KDPVIANKHE WLNATLFAVR DRLVERWLRS 
NRAQLSQETR QVYYLSMEFL IGRTLSNALL SLGIYDDVKG ALEAMGLDLE ELIDEENDPG
LGNGGLGRLA ACFLDSLATL GLPGRGYGIR YDYGMFKQNI VDGRQKESPD YWLEYGNPWE
FKRHNTRYKV LFGGRIQQEG KKARWIETEE ILAVAYDQII PGYDTDATNT LRLWNAQASS
EINLGKFNQG DYFAAVEDKN HSENVSRVLY PDDSTYSGRE LRLRQEYFLV SATVQDILHR
HYQLHKTYEN LADKIAIHLN DTHPVLSIPE LMRLLIDEHK FSWDDAFEVC CQVFSYTNHT
LMSEALETWP VDMLGKILPR HLQIIFEIND YFLKTVQEQY PNDTSLLGRA SIIDESNGRR
VRMAWLAVVV SHKVNGVSEL HSNLMVQSLF ADFAKIFPTR FCNVTNGVTP RRWLALANPP
LSDVLDENIG RTWRTDLSQL SELKQHCDYP LVNHAVRQAK LENKKRLAVV IAQQLNVVVN
PKALFDVQIK RIHEYKRQLM NVLHVITRYN RIKENPEADW VPRVNIFAGK AASAYYMAKH
IIHLINDVAK VINNDPQIGD KLKVVFIPNY SVSLAQVIIP AADLSEQISL AGTEASGTSN
MKFALNGALT IGTLDGANVE MQEHIGEENI FIFGNTAEEV EALRRQGYKP RDYYEKDEEL
HQVLTQIGSG VFNPEEPGRY RDLVDSLINF GDHYQVLADY RSYVDCQDKV DELYRRPEEW
TTKAMLNIAN MGYFSSDRTI KEYAENIWHI DPVRL