Gene SeHA_C3827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3827 
SymbolrtcB 
ID6488669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp3694966 
End bp3696183 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content55% 
IMG OID642743938 
Producthypothetical protein 
Protein accessionYP_002047544 
Protein GI194451088 
COG category[S] Function unknown 
COG ID[COG1690] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAATT ACGAATTAAT GACCACCCAG AACGCACCGG TAAAAATGTG GACCAAAGGC 
GTACCGGTAG AAGACGATGC CCGTCAGCAA CTGATTAATA CGGCGAAAAT GCCGTTTATT 
TTCAAACATA TTGCCGTTAT GCCGGATGTG CATTTGGGGA AAGGATCGAC CATCGGTAGC 
GTGATCCCGA CGAAAGGGGC GATTATTCCG GCGGCGGTGG GCGTGGATAT CGGTTGTGGA 
ATGAACGCGC TGCGTACCAG CTTAACGGCG GCCGATCTGC CGGAAAATCT GGCGGAGCTG 
CGTAGCGCCA TAGAGGCCGC TGTGCCTCAC GGGCGTACCA CCGGACGCGG GCGTCGCGAT 
GTGGGCGCAT GGGGAAACCC GCCCGCCAAC GTTGATGAAA AATGGGCGCA GCTGGAAGCG 
GGATATCAGT GGTTAACGCA AAAATATCCG CGCTTTTTGA ATACCAATAG CTATAAGCAC 
CTGGGAACAT TGGGAACCGG TAACCACTTT ATTGAGATCT GTCTGGATGA AACCGATCGG 
GTATGGATCA TGCTGCACTC CGGTTCGCGC GGGATCGGTA ACGCCATCGG CACCTATTTT 
ATCGGCCTGG CGCAGCAAGA AATGCAGGAG CAGTTAGAAA CGCTGCCGTC CCGCGATCTG 
GCGTATTTTA ATGAAGGAAG CGAATATTTT GACGATTACC TGAAAGCGGT ACACTGGGCG 
CAGCAATTCG CCAGCCTGAA CCGCGAGGCG ATGATGGAAA ACGCGCTGGC GGCGCTCCAG 
CGCTGCGTGG AAAAACCGAT CGCCCTCGAT ATGGACGAGA TAAACTGCCA CCATAACTAT 
GTGCAAAAAG AGCAGCACTT TGGCGAAGAG ATCTATGTGA CGCGTAAAGG GGCGGTTTCG 
GCGCGGCGCG GTGAGTTCGG TATCATTCCT GGTTCGATGG GGGCGAAAAG CTTTATCGTG 
CGCGGGCTGG GTAACGAAGA GTCGTTCTGT TCGTGCAGCC ACGGCGCCGG GCGTGTGATG 
AGCCGAACGA AAGCGAAGAA ACTGTTTAGC GTTGACGATC AGATTCGCGC CACCGCGCAT 
GTCGAATGCC GTAAAGATGC GGACGTGATC GACGAGATCC CAATGGCGTA TAAAGATATT 
GATGCGGTGA TGGCGGCGCA GTCTGACCTG GTGGAAATCA TGTACGCCCT GCGGCAGGTG 
GTGTGCGTTA AAGGATAG
 
Protein sequence
MMNYELMTTQ NAPVKMWTKG VPVEDDARQQ LINTAKMPFI FKHIAVMPDV HLGKGSTIGS 
VIPTKGAIIP AAVGVDIGCG MNALRTSLTA ADLPENLAEL RSAIEAAVPH GRTTGRGRRD 
VGAWGNPPAN VDEKWAQLEA GYQWLTQKYP RFLNTNSYKH LGTLGTGNHF IEICLDETDR 
VWIMLHSGSR GIGNAIGTYF IGLAQQEMQE QLETLPSRDL AYFNEGSEYF DDYLKAVHWA 
QQFASLNREA MMENALAALQ RCVEKPIALD MDEINCHHNY VQKEQHFGEE IYVTRKGAVS 
ARRGEFGIIP GSMGAKSFIV RGLGNEESFC SCSHGAGRVM SRTKAKKLFS VDDQIRATAH 
VECRKDADVI DEIPMAYKDI DAVMAAQSDL VEIMYALRQV VCVKG