Gene SeHA_C3797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3797 
Symbol 
ID6489376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3658773 
End bp3659312 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content59% 
IMG OID642743909 
ProductPilN family protein 
Protein accessionYP_002047515 
Protein GI194449965 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3166] Tfp pilus assembly protein PilN 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.416536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCATT CTGTCAATTT GCTCCCCTGG CGGCGCCAAC ATTACGTAGC GCGTCTGCGG 
CTGTGGTGCG TGGTATGGGG CGCGTCCCTG CTGCTGATAG CAAGCCTCGC GACGATCGCC
CGGTTGGTTT TTTGGCAGGA GGGGAGGATT AATGAACTGC TACTGACGGC GGAAAACGGA
CGCACGACGG CGCTTGCGGC GAACATACCG CAGTTGCAGC AGCGTCAGCG ACAGCAACAG
GCGCGATTAC AACGTCAGGC GCAGCGTGAA CTGACGCAAG CATGGCAATC TATCTTGACT
GACCTTGCCA ACCTGTTGCC AGAACAGGCA TGGCTGACAA GCCTCAATTA TCAGCAAGAG
ACGCTAGAGC TGGAAGGGCT GGCGAGAACG TTTGACGCCC TGCTCACGCT TGAGACATCG
CTTCGTCACT ATGTCAGTTT TCCGCTAAAC CGCACGGGCG CCACGCGGCA GGATGCGCAA
GGGCGCTGGC AGTTCCATTA TCAGTTAACG AGGAGCGCCG CCCGTGAACG CGCTCTTTGA
 
Protein sequence
MAHSVNLLPW RRQHYVARLR LWCVVWGASL LLIASLATIA RLVFWQEGRI NELLLTAENG 
RTTALAANIP QLQQRQRQQQ ARLQRQAQRE LTQAWQSILT DLANLLPEQA WLTSLNYQQE
TLELEGLART FDALLTLETS LRHYVSFPLN RTGATRQDAQ GRWQFHYQLT RSAARERAL