Gene SeHA_C3778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3778 
SymboltsgA 
ID6488339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp3636365 
End bp3637546 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content55% 
IMG OID642743890 
Producthypothetical protein 
Protein accessionYP_002047496 
Protein GI194447901 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value0.974681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAACA GCAACCGCAT CAAGCTCACA TGGATCAGCT TTCTTTCCTA CGCCCTGACC 
GGGGCGCTGG TGATTGTCAC CGGGATGGTG ATGGGAAATA TCGCAGACTA TTTTCATCTG 
CCCGTTTCCA GCATGAGTAA CACCTTTACT TTCCTGAATG CCGGGATTTT GATCTCGATC 
TTCCTCAATG CGTGGCTGAT GGAAATCGTC CCGCTGAAAA CACAGCTACG CTTTGGTTTT 
ATCCTGATGG TGCTGGCGGT GGCCGGGCTG ATGTTCAGCC ATAGCCTGGC GTTGTTCTCA 
GCGGCGATGT TTGTGCTGGG GCTGGTCAGC GGGATCACCA TGTCGATTGG CACCTTCCTG 
ATTACGCAAC TGTATGAAGG GCGTCAGCGC GGTTCCCGAC TGCTGTTTAC CGACTCCTTC 
TTCAGCATGG CGGGAATGAT TTTTCCTATG GTCGCCGCCT TCCTGCTGGC GCGTAGTATT 
GAGTGGTACT GGGTCTACGC CTGCATCGGC CTGGTCTACC TGGCGATTTT CATCCTGACC 
TTCGGCTGTG AATTTCCGGC GCTGGGTAAA CATGCGCAGC ACTCTCAGGC GCCTGTCGTC 
AAAGAAAAAT GGGGCATTGG CGTACTGTTT CTCGCCGTCG CCGCGCTGTG CTATATCCTC 
GGTCAATTAG GCTTTATCTC CTGGGTGCCG GAATACGCCA AAGGCCTCGG CATGAGCCTG 
AATGACGCCG GGGCGCTGGT GAGTGATTTC TGGATGTCCT ATATGTTTGG CATGTGGGCG 
TTCAGCTTTA TCCTGCGCTT TTTCGATCTG CAACGCATTC TGACCGTACT GGCGGGTATG 
GCGGCGGTAC TGATGTATCT GTTTATTACC GGCACGCAGG CGCATATGCC GTGGTTTATT 
CTGACGCTGG GCTTCTTCTC CAGCGCCATT TATACCTCCA TCATTACGCT GGGATCGCAG 
CAAACGAAAG TGGCCTCGCC TAAGCTGGTT AACTTTATTC TGACCTGCGG CACTATCGGA 
ACGATGCTGA CCTTCGTCGT CACCGGCCCG ATTGTGGCGC ACAGCGGCCC ACAGGCGGCG 
TTACTCACCG CGAATGGTCT GTATGCGGTG GTCTTTGTGA TGTGCTTTGC GCTCGGCTTT 
GTCTCCCGTC ATCGTCAGCA TAGCGCGCCG GCTACGCATT GA
 
Protein sequence
MTNSNRIKLT WISFLSYALT GALVIVTGMV MGNIADYFHL PVSSMSNTFT FLNAGILISI 
FLNAWLMEIV PLKTQLRFGF ILMVLAVAGL MFSHSLALFS AAMFVLGLVS GITMSIGTFL 
ITQLYEGRQR GSRLLFTDSF FSMAGMIFPM VAAFLLARSI EWYWVYACIG LVYLAIFILT 
FGCEFPALGK HAQHSQAPVV KEKWGIGVLF LAVAALCYIL GQLGFISWVP EYAKGLGMSL 
NDAGALVSDF WMSYMFGMWA FSFILRFFDL QRILTVLAGM AAVLMYLFIT GTQAHMPWFI 
LTLGFFSSAI YTSIITLGSQ QTKVASPKLV NFILTCGTIG TMLTFVVTGP IVAHSGPQAA 
LLTANGLYAV VFVMCFALGF VSRHRQHSAP ATH