Gene SeHA_C3556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3556 
Symbol 
ID6488855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3446985 
End bp3448028 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content55% 
IMG OID642743679 
Productgalactitol-1-phosphate dehydrogenase 
Protein accessionYP_002047293 
Protein GI194451011 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAG TGGTTATTCA CGCTGAGGGA GACGTGTGCG TTGAAGAACG TCCCTTACCA 
CAACTGCAAG CCGAGGACGA TGTGTTGGTC AAAGTCGTTA GCTCAGGGCT TTGCGGGTCG
GATATCCCGC GTATTTTCGC GCAGGGCGCC CATTATTATC CTATTACGTT AGGCCATGAA
TTCAGCGGCT ACGTTGAATC CTACGGCACA GGCGTAACGG ATATGCAGCC TGGCGATGCC
GTCGCTTGTG TCCCGCTTCT TCCCTGCTTT CACTGTCCGC AATGCGAACG CGGTTACTTT
TCTTTATGCA AACAGTATCA GTTTGTAGGA TCGCGCAGCG AAGGCGGTAA TGCGGAATAT
GTGGTGGTCA AACGGGCCAA TCTTTTCCGC TTGCCGTCTG ATATGCCGAT TGAAGATGGC
GCGTTTATCG AACCGATTAC CGTGGGATTA CACGCCTTTC ATCTGGCGCA GGGCTGCGAG
GGGAAAAACG TAATTATCGT CGGTGCGGGG ACAATTGGCC TGCTGGCCTT ACAGTGCGCG
CGGGAACTGG GCGCGCGAAG CGTAACGGCG ATTGATATCA ATCCGCAGAA ACTGGAACTG
GCGAAAGCGC TCGGCGCAAC GCATACCTGT AATAGCCGGG AAATGACCGC CGACGACATC
CAAACCGCGT TGTCTGACAT TCAGTTTGAT CAACTGGTTC TCGAAACGGC AGGAACTCCC
CAGACCGTCT CGCTGGCTAT CGATATCGCC GGGCCGCGCG CGCAACTGGC GCTGGTGGGG
ACGTTACATC ACGATCTCAC CCTGACAACG CGTACATTCG GGTTAATTTT GCGTAAAGAG
CTCACGCTCC TCGGCAGTTG GATGAACTAC TCCGCGCCAT GGCCAGGAGA GGAATGGGAA
ACCGCAGCGC GCCTGTTGGC TGAAAAACGT CTTCAACTGG CCCCTCTCAT TGCCCATCGC
GGCGATGCGG AAAGCTTTGC AGAAGCAGTC AAAGCGCTTA ATGGCGCGCC CATGCAGGGC
AAAATTTTAC TTCAACTTTC CTGA
 
Protein sequence
MKSVVIHAEG DVCVEERPLP QLQAEDDVLV KVVSSGLCGS DIPRIFAQGA HYYPITLGHE 
FSGYVESYGT GVTDMQPGDA VACVPLLPCF HCPQCERGYF SLCKQYQFVG SRSEGGNAEY
VVVKRANLFR LPSDMPIEDG AFIEPITVGL HAFHLAQGCE GKNVIIVGAG TIGLLALQCA
RELGARSVTA IDINPQKLEL AKALGATHTC NSREMTADDI QTALSDIQFD QLVLETAGTP
QTVSLAIDIA GPRAQLALVG TLHHDLTLTT RTFGLILRKE LTLLGSWMNY SAPWPGEEWE
TAARLLAEKR LQLAPLIAHR GDAESFAEAV KALNGAPMQG KILLQLS