Gene SeHA_C3534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3534 
Symbol 
ID6491246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3425709 
End bp3427148 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content49% 
IMG OID642743662 
Productinner membrane transport protein YhaO 
Protein accessionYP_002047276 
Protein GI194448867 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00814] serine transporter 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value0.846791 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTCT TATTACAAGA AAGTACCTGC ACCTCACGTT CTGCATATCG CCTTGCTGCG 
GCACGAAAAA TAAAAAAAAC CTCTACCTAC ACATTGAGCG AGAATTTTAT GGAATCGGCA
AGTAATACCA GCGTAATCCT CGACGCATCA GCCCCGGCGC GTCGGGCAGG GATGACTGAA
AGCGAATGGC GTGAAGCCAT CAAATTTGAT AGTACCGACA CCGGTTGGGT CATTATGAGT
ATCGGGATGG CGATTGGCGC AGGGATCGTT TTTCTTCCTG TCCAGGTTGG CCTGATGGGA
CTTTGGGTCT TTTTACTCTC TTCTATTATT GGCTATCCGG CCATGTACCT GTTCCAGCGG
CTGTTTATTA ATACGCTGGC GGAATCCCCG GAATGTAAAG ACTACCCCAG CGTGATCAGT
GGCTATCTGG GCAAAAACTG GGGTATTTTA TTAGGCGCGC TGTACTTTGT GATGCTCGTC
ATCTGGATGT TCGTCTATTC TACGGCGATT ACTAACGACA GCGCCTCTTA TCTGCATACT
TTCGGCGTAA CGGAAGGATT GCTTTCCGAT AGTCCATTTT ATGGTCTGGT GCTGATCTGC
ATCCTGGTGG CGATTTCCTC ACGCGGTGAA AAATTACTGT TCAAAATCTC CACTGGCATG
GTGCTGACCA AGCTACTGGT AGTGGCGGCG CTGGGCGTCT CTATGGTGGG TATGTGGCAT
CTGTATAACA TTGGCGCGCT GCCGCCGATG GCCCTGCTGA TTAAAAACGC CATTATTACC
CTGCCATTTA CGCTGACCTC GATTTTATTT ATCCAGACGT TAAGCCCAAT GGTGATCTCT
TACCGTTCAC GCGAAAAATC TATTGAGGTC GCACGCCATA AAGCGCTGCG TGCCATGAAT
ATTGCGTTTG GCATCCTGTT CGTTACCGTA TTTTTCTATG CGGTTTCCTT CACCCTGGCG
ATGGGGCATG ACGAAGCGGT GAAAGCCTAC GAGCAGAATA TTTCCGCCCT GGCGATCGCC
GCGCAATTTA TTAGCGGCGA TGGCGCTGGC TGGGTCAAAG TGGTTAGCGT AATTCTGAAC
ATCTTTGCCG TCATGACCGC CTTCTTTGGC GTTTATTTAG GATTCCGCGA AGCGACGCAA
GGCATTGTGA TGAATATCCT GCGCCGTAAA ATGCCCGCCG AGAAGATTAA GGAAAATCTG
GTACAGCGCG GCATTATGAT TTTCGCTATT TTGCTGGCCT GGAGCGCCAT TGTGCTCAAC
GCGCCGGTAC TGAGCTTCAC CTCTATTTGT AGCCCTATCT TCGGTATGGT GGGCTGTTTA
ATTCCGGCAT GGTTGGTCTA CAAGGTTCCC GCATTGCACA AATATAAAGG CGCTTCGTTG
TACCTGATTA TTATTACCGG TCTGCTGCTA TGCGTTTCTC CGTTCCTGGC ATTCTCTTGA
 
Protein sequence
MIFLLQESTC TSRSAYRLAA ARKIKKTSTY TLSENFMESA SNTSVILDAS APARRAGMTE 
SEWREAIKFD STDTGWVIMS IGMAIGAGIV FLPVQVGLMG LWVFLLSSII GYPAMYLFQR
LFINTLAESP ECKDYPSVIS GYLGKNWGIL LGALYFVMLV IWMFVYSTAI TNDSASYLHT
FGVTEGLLSD SPFYGLVLIC ILVAISSRGE KLLFKISTGM VLTKLLVVAA LGVSMVGMWH
LYNIGALPPM ALLIKNAIIT LPFTLTSILF IQTLSPMVIS YRSREKSIEV ARHKALRAMN
IAFGILFVTV FFYAVSFTLA MGHDEAVKAY EQNISALAIA AQFISGDGAG WVKVVSVILN
IFAVMTAFFG VYLGFREATQ GIVMNILRRK MPAEKIKENL VQRGIMIFAI LLAWSAIVLN
APVLSFTSIC SPIFGMVGCL IPAWLVYKVP ALHKYKGASL YLIIITGLLL CVSPFLAFS