| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C3478 |
|---|
| Symbol | |
|---|
| ID | 6488025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 3379784 |
|---|
| End bp | 3381754 |
|---|
| Gene Length | 1971 bp |
|---|
| Protein Length | 656 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642743607 |
|---|
| Product | phage tail tape measure protein, TP901 family, core region |
|---|
| Protein accession | YP_002047221 |
|---|
| Protein GI | 194449652 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.000000000000755136 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGT TAGATTTTAC ATTAAGCCTG ATTGATAAGT TGTCCCGCCC GTTAAAACAG
GCACAGAGCA GCGTCACCGG CTTTGCGGAA AAATCAAAAG CGGCCTTTAT GCAGATTGGC
GGTGGTGTGC TGGCTTTAGC GGGTACAGGA ATGGCCATAC GGGGTGCGTT ATCACCGGCA
ATTGAAATGT ATGATGCGCT GAATGATGCA GCATCAAAAG GGATTGATGA TCAGGCATTA
AAGGCCGTAC AGCGGGATGC GCTGCGCTTC AGTACAACTT ATGGCGCCAG TGCGGTGGAA
TTTGTTCAGT CCACTGAAAG TATTAATTCC GCCATTGCCG GGCTGACCGG TAATGAACTG
CCGAAAGTGA CAAAAGTTGC TAATACCCTG GCGTTTGCCC TGAAATCCAC CGCCGCAGAA
ACGGCGGAAT TTATGGGGCA GATGTTTGGT AATTTTTCCG CCGATGCGGA GCGTCTGGGC
AAGGTTCAGT TCGCTGAGCA GCTGGCCGGA AAAATGGTGT ATATGCGCAA GGTCTTCGGT
ACTGAAATGG GCACTATCAA AGACCTGATG GAAGGGGCGC GGGGCGTCGG TACCAACTAC
GGCGTCGGAC TGGATGAACA GCTGGCCGTA CTGGGGCAGC TTAACCGCAC GCTGGGAACG
GAAGCCAGCA GCGCTTACGA AGGCTTCATG ACCGGAGCCA TTGAGGGCGG TAAAAAGCTG
GGGCTGTCCT TTACGGATGC CACCGGCAAA ATGCTGTCCA TGCCTGAGAT GCTGATTAAA
TTGCAGGGCA AATACGGCAA GAGCCTGGAA GGGAACCTGA AAGCCCAGGA GGAACTGGAT
GCGGCATTCG GTGACAGTTC GGCTGTGGTC AAACACCTTT ACGGTAATGT GGCGCTTCTC
CAGAGGAACA TCACCGAACT GGGCGGATCT GACGGTCTGA AACGTACGCA GGAGATGGCC
AGTAAACTGG TGAAACCGTG GGATCGGTTT GTACAAATCC TGAAAGCTAT TCAGACCGTA
ATAGGGCTGA CACTAATCCC GGTATTGTAT CCGGTGCTGA ATCGTCTGGC GGATATGGGA
CAGACATTTG CCAGATGGAT GCAGCTATTT CCCAACATTG CCCGTGTTAT CGGCTACGCA
GCTATGGCGT TGCTGGGGTT TGCGGCAGTG GGCGCGGTTG CCAATATTGT GATGGGCGCT
TCTAAGTTCA TCATGGCAGG TTTACGCGGG ATCTGGGTTG CCATGACCGC CGTCACGAAA
GCATATACGG CAATGGTATG GTTGGCACAA ATTGCTGTTA TCGCCTGGAA TGCGACGCTT
AAATTTTTGC GCGGAGCGTT GCTGGCCGTT CGTATGGCGG CAATCATGGC CGGAATCGGT
ATTAATCTTA TGAGCTGGCC GGTCTTGCTT GTGATCGGGG CGATAGCGTT GCTTGCGGCG
GGTTGCTGGT TGCTGATTAA ACACTGGGAT ACGGTGAAAG CGGCTGTTAT GGAAACATCC
GCGTTTCAGG CATGTGCCAG GGGGGTGGCG TGGCTGGCCG GGGTGTTTTC CACAGCATGG
CAATTTATCA GTGAAGGCTG GAACAGTTTT ATTGCGCTAT TAACAGAGTT TTCACCCTCA
CAGGCATTAA GTGGACTAGC GTCGGGTATT GTATCCATGT TTGATAATGT CTGGCAGTCC
GTTAAAGGTG GTTTTCTGAA ATCGTGGAAC TGGATTGTTG AGAAGCTGAA TAAAATACCC
GGCGTTGATA TCTCAATGGC TAATGAAACC TCTTCGCCAC CATTAACAGT AAATAATTTA
TCTACAGGTG GCGAGCTAAA AGGAATTGAT AAAGGTGGTA TCAGTAAATC TGTCAGTAAT
AACTCAAGGT CTGTGACGGA TAACAGCCGG AAAATTAATA CTGTCAATAT CTATCCAAAA
GAAATGATAA CGCCGGGGCA GTTAATGGAG TTTCAGGAGT TGGGCGTATG A
|
|---|
| Protein sequence | MKQLDFTLSL IDKLSRPLKQ AQSSVTGFAE KSKAAFMQIG GGVLALAGTG MAIRGALSPA
IEMYDALNDA ASKGIDDQAL KAVQRDALRF STTYGASAVE FVQSTESINS AIAGLTGNEL
PKVTKVANTL AFALKSTAAE TAEFMGQMFG NFSADAERLG KVQFAEQLAG KMVYMRKVFG
TEMGTIKDLM EGARGVGTNY GVGLDEQLAV LGQLNRTLGT EASSAYEGFM TGAIEGGKKL
GLSFTDATGK MLSMPEMLIK LQGKYGKSLE GNLKAQEELD AAFGDSSAVV KHLYGNVALL
QRNITELGGS DGLKRTQEMA SKLVKPWDRF VQILKAIQTV IGLTLIPVLY PVLNRLADMG
QTFARWMQLF PNIARVIGYA AMALLGFAAV GAVANIVMGA SKFIMAGLRG IWVAMTAVTK
AYTAMVWLAQ IAVIAWNATL KFLRGALLAV RMAAIMAGIG INLMSWPVLL VIGAIALLAA
GCWLLIKHWD TVKAAVMETS AFQACARGVA WLAGVFSTAW QFISEGWNSF IALLTEFSPS
QALSGLASGI VSMFDNVWQS VKGGFLKSWN WIVEKLNKIP GVDISMANET SSPPLTVNNL
STGGELKGID KGGISKSVSN NSRSVTDNSR KINTVNIYPK EMITPGQLME FQELGV
|
|---|
| |