Gene SeHA_C3087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3087 
Symbol 
ID6491274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3014996 
End bp3016114 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content46% 
IMG OID642743238 
Productinvasion protein InvE 
Protein accessionYP_002046857 
Protein GI194447587 
COG category 
COG ID 
TIGRFAM ID[TIGR02511] type III secretion effector delivery regulator, TyeA family
[TIGR02568] type III secretion regulator YopN/LcrE/InvE/MxiC 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCTG GCTCAACCTC CGGTATTTCA TTTTCCAGAA TATTGTCCCG GCAGACATCT 
CACCAGGATG CGACCCAGCA TACTGATGCG CAACAGGCGG AAATACAACA GGCCGCGGAG
GATTCGTCTC CAGGGGCGGA AGTACAAAAA TTTGTCCAGT CGACGGACGA AATGTCAGCG
GCGCTGGCGC AATTTCGTAA CCGTCGCGAT TATGAAAAAA AATCCAGTAA TTTATCTAAC
AGTTTTGAAC GCGTGCTGGA GGATGAGGCT TTACCGAAGG CGAAGCAAAT ATTAAAGCTA
ATTAGCGTAC ATGGCGGCGC GTTAGAAGAT TTTTTACGTC AGGCGCGTAG CTTATTTCCT
GACCCCAGTG ATTTAGTCCT TGTGTTACGC GAATTGCTTC GTCGTAAAGA TCTGGAAGAG
ATCGTGCGGA AAAAGCTGGA GTCGTTACTT AAGCACGTTG AAGAGCAAAC CGATCCGAAG
ACCCTCAAGG CAGGGATTAA TTGTGCGTTG AAGGCCCGGC TTTTTGGGAA AACATTATCG
TTAAAACCAG GCTTATTGCG CGCCAGCTAT CGGCAATTTA TCCAGAGTGA ATCACATGAA
GTGGAGATTT ACTCTGACTG GATAGCCAGT TATGGCTATC AACGTCGACT GGTGGTACTG
GATTTTATCG AGGGTTCGCT ATTAACCGAT ATTGACGCGA ATGACGCCAG CTGTTCGCGC
CTGGAGTTTG GCCAGCTTTT ACGACGCCTG ACGCAACTTA AAATGTTGCG CTCCGCTGAC
CTGCTGTTTG TGAGTACATT GTTGTCGTAT TCGTTTACCA AAGCGTTTAA TGCGGAGGAG
TCGTCGTGGC TACTACTGAT GCTTTCGCTA TTGCAACAGC CACATGAAGT GGATTCGCTG
TTAGCCGATA TTATAGGTTT GAATGCGTTA TTGCTTAGTC ATAAAGAACA TGCATCCTTT
TTGCAGATAT TTTATCAAGT ATGTAAAGCC ATACCCTCTT CACTCTTTTA TGAAGAATAT
TGGCAGGAAG AATTGTTAAT GGCGTTACGT AGTATGACCG ATATTGCCTA CAAGCATGAA
ATGGCAGAAC AGCGTCGTAC TATTGAAAAG CTGTCTTAA
 
Protein sequence
MIPGSTSGIS FSRILSRQTS HQDATQHTDA QQAEIQQAAE DSSPGAEVQK FVQSTDEMSA 
ALAQFRNRRD YEKKSSNLSN SFERVLEDEA LPKAKQILKL ISVHGGALED FLRQARSLFP
DPSDLVLVLR ELLRRKDLEE IVRKKLESLL KHVEEQTDPK TLKAGINCAL KARLFGKTLS
LKPGLLRASY RQFIQSESHE VEIYSDWIAS YGYQRRLVVL DFIEGSLLTD IDANDASCSR
LEFGQLLRRL TQLKMLRSAD LLFVSTLLSY SFTKAFNAEE SSWLLLMLSL LQQPHEVDSL
LADIIGLNAL LLSHKEHASF LQIFYQVCKA IPSSLFYEEY WQEELLMALR SMTDIAYKHE
MAEQRRTIEK LS