| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C2997 |
|---|
| Symbol | emrA |
|---|
| ID | 6489655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 2936289 |
|---|
| End bp | 2937461 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642743153 |
|---|
| Product | multidrug resistance protein A |
|---|
| Protein accession | YP_002046777 |
|---|
| Protein GI | 194451420 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.00138717 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAA ATGCGGAGAT CCAAACCCCG CAGCAACCGG CTAAGAAGAA AGGCAAACGC
AAAACAGCGC TGCTACTTCT TACCTTGCTC TTTGTTATTA TTGCCGTGGC ATATGGAATT
TATTGGTTTT TAGTATTGCG TCATATTGAA GAGACAGATG ATGCTTACGT GGCAGGGAAC
CAGGTTCAAA TCATGGCGCA GGTGTCAGGC AGCGTGACGA AAGTCTGGGC TGATAACACC
GACTTTGTAA AAGAGGGCGA TGTTCTGGTC ACGCTCGATC AGACTGACGC CAAACAAGCG
TTTGAAAGAG CCAAAACGGC GCTGGCCTCC AGCGTGCGCC AAACGCACCA GTTGATGATT
AACAGTAAGC AGTTGCAGGC GAATATCGAC GTGCAAAAAA CCGCCCTGGC GCAAGCGCAA
AGCGACCTTA ACCGTCGTGT GCCGCTGGGT AATGCCAATC TTATTGGCCG GGAAGAGCTG
CAACACGCCC GCGATGCCGT CGCCAGCGCG CAGGCACAGC TGGATGTCGC CATTCAACAG
TACAATGCCA ACCAGGCAAT GATACTCAAC AGTAATCTGG AAGATCAGCC CGCGGTTCAA
CAAGCGGCGA CCGAAGTGCG TAACGCCTGG CTGGCGCTGG AGCGTACTCG CATCGTCAGC
CCAATGACTG GTTATGTCTC CCGCCGCGCC GTCCAGCCTG GCGCGCAAAT CAGCCCCACC
ACGCCGCTGA TGGCCGTGGT GCCTGCAACC GATCTGTGGG TGGACGCTAA CTTTAAAGAA
ACCCAATTAG CGAATATGCG CATTGGGCAG CCAGTGACGG TGATTACTGA TATTTATGGC
GACGACGTAA AATACACCGG TAAAGTCGTC GGTCTGGATA TGGGAACAGG CAGCGCCTTC
TCCCTGCTGC CCGCGCAAAA TGCGACGGGT AACTGGATTA AAGTGGTTCA ACGTCTGCCG
GTACGCGTCG AACTGGACGC CCGCCAGTTA GAACAACATC CGCTGCGCAT TGGTTTATCG
ACGCTGGTCA CCGTGGATAC CGCTAATCGC GACGGTCAGG TACTGGCCAG CCAGGTACGA
ACGACGCCGG TTGCCGAAAG TAACGCACGC GAAATTAATC TCGCGCCGGT CAATAAACTG
ATCGACGACA TCGTACAGGC TAACGCGGGT TAA
|
|---|
| Protein sequence | MSANAEIQTP QQPAKKKGKR KTALLLLTLL FVIIAVAYGI YWFLVLRHIE ETDDAYVAGN
QVQIMAQVSG SVTKVWADNT DFVKEGDVLV TLDQTDAKQA FERAKTALAS SVRQTHQLMI
NSKQLQANID VQKTALAQAQ SDLNRRVPLG NANLIGREEL QHARDAVASA QAQLDVAIQQ
YNANQAMILN SNLEDQPAVQ QAATEVRNAW LALERTRIVS PMTGYVSRRA VQPGAQISPT
TPLMAVVPAT DLWVDANFKE TQLANMRIGQ PVTVITDIYG DDVKYTGKVV GLDMGTGSAF
SLLPAQNATG NWIKVVQRLP VRVELDARQL EQHPLRIGLS TLVTVDTANR DGQVLASQVR
TTPVAESNAR EINLAPVNKL IDDIVQANAG
|
|---|
| |