Gene SeHA_C2956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2956 
Symbol 
ID6488775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp2902883 
End bp2903812 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content45% 
IMG OID642743113 
Productvirulence protein 
Protein accessionYP_002046737 
Protein GI194451263 
COG category[S] Function unknown 
COG ID[COG2990] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.492438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.00000541429 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGATGC AGCAAAGTGA TATGGAAAGA TATAATCCAT TATTAATGTT AAAAGAAGTC 
ATGGCGCAGA CGCCTTATCG CCATAAACGC TGGGGAGAGC GTAAGTTTCG CTATAAATTT 
TTATTACGTT GCCTTATTAA CCCCGTAACG ACAATTAAAT ACTTCAATGA ATTATGCCAT 
CTGTCTCAGC CCAGAACGCT GATTATTCAT CGTCCACTGT TGCCGGCAAA AATCCAGCGG 
CCCTATTTGT ATACCGGGCT TAGCATACGT TGCCGGGCAA AAGCTATTCT GGAACACTAC 
CAGTTCGTTC AGTCCTTTCC GGAAAGTAAA ATTAAAAAGA TCCTCCTGTC CGAGGAACAA 
ATCTTACTCG CTCACCTGGA AGGAAAAAAC GGCGCTCTGG TAGATATCTA CTGCGGTCCC 
TGTGGCTATG ACAGAGAAGG TGAGCTGACA TTAACGCTGT GTTTCAATGA TACGCCGTTG 
GCACGTTTAT CATTTTCCTT TATCCGCCAT GAAGGGAAGC AAATAGCGCT GGTTGCCGGG 
TTACAAGGGC CCAGTAAACA TGTCGGCCCA CAAGTCATAC GTAACGCCAC CAAAGATTGT 
TACGGTCTCT TTCCTAAACG GATGCTGTAT GAAGCTTTTG CAACATTGAT GCAGGCCTGT 
AATGTCGACG AGATTTATGC GGTAAGTGAA AACAACCATG TTTATCGTCA ACTCCGGTAC 
TTATTCCAGA AGAAAAAAAC TTTTGTGGCC AGCTATAGTG AATTCTGGGA GTCGCTAAAC 
GGCGTTAAGA AAGGTGCCTT ATATCATCTG CCATCACAGG TGATGCGTAA AGCGCCTGAA 
AGTATCCCCA GCAAAAAACG CGCAGAGTAT CGGAAACGCT ATCATATTCT GGATACAATA 
ATACAAGAGG TTAACAGCCT CTCCCGGTAG
 
Protein sequence
MTMQQSDMER YNPLLMLKEV MAQTPYRHKR WGERKFRYKF LLRCLINPVT TIKYFNELCH 
LSQPRTLIIH RPLLPAKIQR PYLYTGLSIR CRAKAILEHY QFVQSFPESK IKKILLSEEQ 
ILLAHLEGKN GALVDIYCGP CGYDREGELT LTLCFNDTPL ARLSFSFIRH EGKQIALVAG 
LQGPSKHVGP QVIRNATKDC YGLFPKRMLY EAFATLMQAC NVDEIYAVSE NNHVYRQLRY 
LFQKKKTFVA SYSEFWESLN GVKKGALYHL PSQVMRKAPE SIPSKKRAEY RKRYHILDTI 
IQEVNSLSR