Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C2950 |
Symbol | |
ID | 6488427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 2892080 |
End bp | 2895736 |
Gene Length | 3657 bp |
Protein Length | 1218 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642743108 |
Product | ATP-binding protein |
Protein accession | YP_002046732 |
Protein GI | 194451604 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1.03128e-16 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCGCGA CTCATTCCCC CATGCCCGCT CGTGCCTGGA TAGTTCGCCT TGCCCGCGTG TGTTGGGAAC GTAAAACACT GAGCATCATT GTCATCGTAG CATCAGTATC GACCATTTTA CTGGCTGCGC TGACGCCGCT AATAACGCGT CAGGCCGTCA ATGACGCGAT AGCAGGCGAT ACGACCCACC TGCCGTTACT TGCCTGCGGC CTGCTGTTAA TTGCCCTTTT TGATTTTATC GGGAATTACG TGCGCCGCGG CTATGCCGGG GAACTCTCGT TGTGGGTTCA GCATACGTTA CGTAGCCGTG CGTTCGACAG TATTCAAAAA CTGGACGGCG CAGGCCAGGA CGCCTTACGT ACCGGGCAGG TCATTTCGCG TACCAACAGC GATCTTCAAC AGGTACACAC CTTGCTACAA ATGTGCCCGG TGCCGATGGC GGTACTCACT TACTATGTGG CCGGTATCGC GGTGATGCTA TGGATGTCGC CATCCATGAC GCTTATCGTG ATTTGCGTAC TGGCCGCCCT TGCCATTACC GCCCTGCGCG CCCGTCGCCG TGTTTTCGCG CAAACGGGGC TTGCCTCAGA CCGGCTGGCG CACATGACGG AACATATGCG CGAAGTATTG GAACAGATCT CAGTGGTGAA GTCCTGCGTG GCGGAGTTAC GCGAAACGCG TTGGCTCGAT GGTCAGTCGC GGCAGATGGT GCGGGTACGC ATCGGCGCCG CTATCTCGCA GGCGATGCCG GGCGCAACCA TGCTGGCGCT ACCGGTGATA GGGCAAATCG TCCTGCTGTG CTATGGCGGC TGGTCGGTAA TGAATGGGCG CATCGATCTG GGAACCTTCG TTGCGTTCGC GAGTTTTCTC GCTATGCTGA CCGGCCCCAC CCGCGTACTG GCATCGTTTT TGGTTATTGC ACAGCGCACA CAGGCGTCGG TGGAGCGCGT CTTCGCGCTT ATCGACACGC GTTCTCGCAT GGAAGACGGT ACTGAGTCGA TTGAAGGTCA GATTATCGGG CTGGACGTGG AGAAGATGAG TTTCCACTAC GACAACGGTA ACCGTATCCT CAATGAGATC TCGTTTTCCA TTCACGCCGG TGAAACCGTG GCGGTGGTTG GCGCCTCCGG CTCCGGGAAA TCAACGTTGC TGATGTTGCT GGCGCGCTTT TACGATCCCG CCTCCGGCGG GGTGTGGCTC AACACCACTA CGGGTCAACA GAATATTCGC GACCTGAAAC TGACGGCGCT TCGTCGTCGC GTTGGCGTAG TTTTTGAAGA CGCGTTTCTG TTTGCCGGTA CGGTGGCGGA AAACATCGCC TATGGGCACC CGCAAGCGAC TCAGGACGAC ATTCGACGCG CCGCCGATGC CGCAGGCGCC AGCGGGTTCA TCAATGCGCT ACCGCAGGGG TTCAACACCC GACTGACCGA ACGCGGAAGC AACCTCTCCG GTGGCCAACG CCAGCGTATT GCGCTAGCCC GGGCACTGAT TACCGCGCCG GAACTGCTGA TTCTCGATGA CACCACCTCG GCGGTCGATG CCGGTACTGA AGCGGAAATT AACACGGCTC TTGGTCGTTA TGCCGATAAT GAGCATATGC TGCTGGTGAT TGCACGCCGC CGTTCAACAC TGCAGTTAGC CGATCGGATC GTCGTGCTGG ATAAAGGCCG CGTCGTGGAT ATCGGTACCC AGGCGGAGCT GGATGCAAGG TGTCCGACGT TTCGCTCGCT GATGAGCGGC GAGGGGGATT TTCTCGCCCT TGCCCCAGCA GAACAACGTA CGCTATGGCC AACAACGCAG GCGGTAAAAT CCGACGACGC GCATGAGCGC CAGACACCCG CCGGAAAAGG TTTTGTCGAC CGGATGACGC GCGTTCCAGA ACGCGCCGTA CAGATGGCGC TGGCAGGCCA CGGGCGTCAA GTCTCATCGC TGCTGACGCC AGTAGCCTGG ATGTTCGTCA TCGCCGCCCT GCTTATCGCG CTTGATTCCG CCGCAGGCGT TGGCGTGCTG GTGCTTTTGC AGCGCGGTAT TGACTCAGGC GTTGCCGCAG GGGATATGTC GACTATTGGC ATATGCGCCC TGCTCGCGCT GTGCCTGGTG GCGATCGGTT GGTGCTGCTA TGCGCTGCAA ACGATCTTCG CCGCCCGCGC GGCAGAGTCG GTACAGCATA CGGTACGCTT ACGCAGCTTC AGCCACCTGC TACGCCTGAG TCTTCCCTGG CACGAGAAGC ACATCGACTC GCGTCTTACT CGCATGACCG TCGACGTTGA TTCACTCGCC CGATTTCTGC AAAACGGTCT TGCCAGCGCG GCCACCAGCA TCGTGACGAT GGTCGCTATC GCCGCGGCAA TGTTCTGGCT TGACCCCATT CTTGCGTTAA CGGCATTAAG CGCCGTACCT GTAGTGATAC TGGCGACGTG GATTTACCGC CGTTTGAGCT CGCCTGCTTA CGCCCAGGCA CGGCTGGAAA TTGGTAAGGT GAACAGTACG CTTCAGGAAA AGGTCTCCGG TATGCGGGTA GTGCAGTCAC ACGGTCAACA GAAGCAGGAA GCCGCCAGGC TACGGGCGTT ATCAGACAAC TTCCGCGCCA CCCGCGTGCG GGCGCAAAAA TACCTTGCCG TTTATTTTCC GTTCCTGACC TTCTGCACCG AGGCCGCCTA TGCCGCCGTG CTTTTAATCG GGGCGACCCG GGTCGCCGGA GGCGAAATGA CGCCCGGGAT ACTGGCGGCG TTCTTCCTGC TACTGGGACA ATTTTATGGC CCGGTACAGC AGTTGTCAGG CATTGTTGAT TCCTGGCAGC AGGCGACCGC CAGCGGCAAA CATATCAATG CGCTATTGGC GACTGAGGAC ACGGAGAATA TTGAACCGTC CTCCATAACG CCTGGCACTG GCGGCGCGCT ACGTCTGGAG GCATTGACAT TCCGCTATCC CGAAAAAACG CAACCTGTGC TTGATAAGCT CTCGCTCACC ATTCCGCCAG GAACGGTAGT CGCGGTGGTC GGACGTAGCG GCGCTGGCAA ATCGACGCTG ATCAAGCTGC TGGCCGGGCT CTACTCTCCC GGCAGCGGGC AAATCCGTGT CGGTGAGCGC CTAATTGATG CCGCGTCGCT TAGTGATTAT CGTCGCCAGA CGGGGCTGGT CACTCAGGAT GTCGCATTAT TTAGCGGCGA TATTGCCGAA AATATCCGCT ATTCGCGGCC AGACAGCAGC GACACGGAGG TGGAGAGCGC GGCGCGACGG GCGGGACTCT TTGAAACTGT GCAACATCTG CCGCTGGGGT TTCGTACTCC GGTCAATAAC GGCGGCACGG ATCTGTCCGC GGGCCAGCGT CAGTTGATTG CCCTCGCCCG CGCCCACCTG GCGCAGGCGC ATATTCTGCT GCTCGACGAG GCGACAGCGC GTATCGACCG TAGCGCCGAG GAGCGCTTAA TGACCTCGCT GACCAGGGTG ACGCATACCG AGAAACGCAT CGCGCTTATC GTCGCGCACC GGCTGACCAC CGCTCGCCGC TGCGATGTGA TTGTCGTAAT CGATAAAGGA TGTATCGCTG AATATGGCAG CCATGAGCAG TTGATAGCGG CTCATGGCCT GTATGCTCGT CTGTGGCGGA ACAGCATCGG CCAGACACGC GATACGCAAG GAGAGGTCAT AGGATAG
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Protein sequence | MPATHSPMPA RAWIVRLARV CWERKTLSII VIVASVSTIL LAALTPLITR QAVNDAIAGD TTHLPLLACG LLLIALFDFI GNYVRRGYAG ELSLWVQHTL RSRAFDSIQK LDGAGQDALR TGQVISRTNS DLQQVHTLLQ MCPVPMAVLT YYVAGIAVML WMSPSMTLIV ICVLAALAIT ALRARRRVFA QTGLASDRLA HMTEHMREVL EQISVVKSCV AELRETRWLD GQSRQMVRVR IGAAISQAMP GATMLALPVI GQIVLLCYGG WSVMNGRIDL GTFVAFASFL AMLTGPTRVL ASFLVIAQRT QASVERVFAL IDTRSRMEDG TESIEGQIIG LDVEKMSFHY DNGNRILNEI SFSIHAGETV AVVGASGSGK STLLMLLARF YDPASGGVWL NTTTGQQNIR DLKLTALRRR VGVVFEDAFL FAGTVAENIA YGHPQATQDD IRRAADAAGA SGFINALPQG FNTRLTERGS NLSGGQRQRI ALARALITAP ELLILDDTTS AVDAGTEAEI NTALGRYADN EHMLLVIARR RSTLQLADRI VVLDKGRVVD IGTQAELDAR CPTFRSLMSG EGDFLALAPA EQRTLWPTTQ AVKSDDAHER QTPAGKGFVD RMTRVPERAV QMALAGHGRQ VSSLLTPVAW MFVIAALLIA LDSAAGVGVL VLLQRGIDSG VAAGDMSTIG ICALLALCLV AIGWCCYALQ TIFAARAAES VQHTVRLRSF SHLLRLSLPW HEKHIDSRLT RMTVDVDSLA RFLQNGLASA ATSIVTMVAI AAAMFWLDPI LALTALSAVP VVILATWIYR RLSSPAYAQA RLEIGKVNST LQEKVSGMRV VQSHGQQKQE AARLRALSDN FRATRVRAQK YLAVYFPFLT FCTEAAYAAV LLIGATRVAG GEMTPGILAA FFLLLGQFYG PVQQLSGIVD SWQQATASGK HINALLATED TENIEPSSIT PGTGGALRLE ALTFRYPEKT QPVLDKLSLT IPPGTVVAVV GRSGAGKSTL IKLLAGLYSP GSGQIRVGER LIDAASLSDY RRQTGLVTQD VALFSGDIAE NIRYSRPDSS DTEVESAARR AGLFETVQHL PLGFRTPVNN GGTDLSAGQR QLIALARAHL AQAHILLLDE ATARIDRSAE ERLMTSLTRV THTEKRIALI VAHRLTTARR CDVIVVIDKG CIAEYGSHEQ LIAAHGLYAR LWRNSIGQTR DTQGEVIG
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