| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C2540 |
|---|
| Symbol | |
|---|
| ID | 6491808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 2455634 |
|---|
| End bp | 2456533 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642742720 |
|---|
| Product | polysaccharide deacetylase domain-containing protein |
|---|
| Protein accession | YP_002046354 |
|---|
| Protein GI | 194450240 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.742561 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 0.731113 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAAG TCGGTTTACG CATTGATGTT GATACCTTGC GAGGAACGCG TGAAGGTGTT
CCCCGGCTGC TGGCGACATT GCATCGCCAC GGCGTTCAGG CCAGCTTTTT CTTCAGCGTC
GGGCCGGACA ATATGGGACG TCATCTTTGG CGTCTGATAA GACCGCGATT TTTATGGAAA
ATGCTACGTT CAAACGCCGC TTCGCTCTAC GGCTGGGATA TCCTGCTGGC CGGTACCGCC
TGGCCGGGAA AAAATATCGG CAACGCCAAT GCCGGGATTA TTCGTGAAAC GGCAACATAC
CATGAGACGG GACTACATGC CTGGGATCAC CATGCGTGGC AGACTCACAG CGGCCACTGG
AGTATCCGCC AGCTTGAAGA AGATATCGCG CGCGGCATAA CGGCGCTTGA GGCCATTATC
GGAAAACCCG TCACCTGCTC AGCCGCGGCC GGCTGGCGAG CGGATGGGCG CGTTGTTCGT
GCGAAAGAGC CGTTCAACCT GCGGTATAAC AGCGATTGCC GTGGAACCAC CTTATTCCGT
CCGCTACTGA TGCCGGACCA GACAGGGACG CCGCAAATCC CCGTCACCTT ACCCACATGG
GATGAGGTTA TCGGCCCCGC CGTTCAGGCG CAGTCGTTCA ATACCTGGAT TATCTCCCGT
ATGTTGCAGG ACAAAGGCAC GCCGGTATAT ACCATCCATG CGGAAGTCGA AGGTATTGTC
CATCAGCCGC TGTTTGAAGA TTTGCTCGTT CGTGCACGTG ACGCGGGGAT CACCTTTTGT
CCTCTGGGCG AACTGCTGCC GACATCGCCT GAGTCTCTGC CGTTGGGGCA AATTGTACGT
GGACACATCC CTGGCCGTGA AGGTTGGCTG GGGTGTCAAC AGGCAGCGAG CGCCTCATGA
|
|---|
| Protein sequence | MTKVGLRIDV DTLRGTREGV PRLLATLHRH GVQASFFFSV GPDNMGRHLW RLIRPRFLWK
MLRSNAASLY GWDILLAGTA WPGKNIGNAN AGIIRETATY HETGLHAWDH HAWQTHSGHW
SIRQLEEDIA RGITALEAII GKPVTCSAAA GWRADGRVVR AKEPFNLRYN SDCRGTTLFR
PLLMPDQTGT PQIPVTLPTW DEVIGPAVQA QSFNTWIISR MLQDKGTPVY TIHAEVEGIV
HQPLFEDLLV RARDAGITFC PLGELLPTSP ESLPLGQIVR GHIPGREGWL GCQQAASAS
|
|---|
| |