Gene SeHA_C2425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2425 
Symbol 
ID6490479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2334206 
End bp2335204 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content51% 
IMG OID642742608 
ProductD-galactose-binding periplasmic protein 
Protein accessionYP_002046243 
Protein GI194447760 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.374419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGA AGGTACTGAC CCTTTCTGCC GTGATGGCAA GTCTGTTATT CGGCGCGCAC 
GCGCACGCGG CTGATACTCG TATTGGCGTG ACGATTTATA AATATGACGA TAACTTTATG
TCCGTGGTGC GTAAGGCTAT TGAAAAAGAT GGCAAATCCG CGCCGGATGT TCAGCTACTG
ATGAATGACT CGCAAAACGA TCAATCCAAA CAGAATGATC AAATTGACGT TTTATTGGCG
AAAGGGGTTA AAGCTCTGGC GATTAACCTG GTCGACCCGG CAGCTGCCGG TACGGTGATT
GAGAAAGCGC GCGGGCAAAA TGTGCCGGTG GTGTTCTTTA ACAAAGAGCC TTCCCGCAAA
GCGCTGGACA GCTATGACAA GGCGTATTAT GTCGGGACTG ACTCTAAAGA ATCCGGTGTG
ATTCAGGGCG ACTTGATTGC CAAACACTGG CAGGCGAATC AGGGTTGGGA TCTGAATAAA
GACGGTAAAA TTCAGTATGT TCTGCTGAAA GGCGAGCCGG GGCACCCGGA TGCTGAAGCC
CGTACGACGT ATGTGGTGAA AGAGTTAAAT GATAAAGGTA TTCAGACCGA GCAACTGGCG
TTAGACACCG CCATGTGGGA TACCGCGCAG GCAAAAGATA AGATGGATGC CTGGCTATCT
GGCCCGAACG CTAACAAGAT TGAAGTGGTT ATCGCGAATA ACGATGCGAT GGCGATGGGC
GCGGTAGAGG CGCTGAAAGC GCATAATAAA TCGTCGATTC CGGTCTTTGG CGTCGATGCG
TTACCGGAAG CTTTGGCGCT GGTGAAATCG GGCGCGATGG CCGGTACGGT ACTGAATGAC
GCCAACAATC AGGCGAAAGC GACATTCGAT CTGGCGAAAA ACCTCGCCGA AGGCAAGGGC
GCGGCTGACG GCACCAGCTG GAAGATTGAG AACAAAATCG TGCGCGTGCC TTATGTCGGC
GTGGACAAAG ACAATCTGAG CGAATTTACC CAAAAATAA
 
Protein sequence
MNKKVLTLSA VMASLLFGAH AHAADTRIGV TIYKYDDNFM SVVRKAIEKD GKSAPDVQLL 
MNDSQNDQSK QNDQIDVLLA KGVKALAINL VDPAAAGTVI EKARGQNVPV VFFNKEPSRK
ALDSYDKAYY VGTDSKESGV IQGDLIAKHW QANQGWDLNK DGKIQYVLLK GEPGHPDAEA
RTTYVVKELN DKGIQTEQLA LDTAMWDTAQ AKDKMDAWLS GPNANKIEVV IANNDAMAMG
AVEALKAHNK SSIPVFGVDA LPEALALVKS GAMAGTVLND ANNQAKATFD LAKNLAEGKG
AADGTSWKIE NKIVRVPYVG VDKDNLSEFT QK