Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C2384 |
Symbol | |
ID | 6492421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 2291443 |
End bp | 2293932 |
Gene Length | 2490 bp |
Protein Length | 829 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642742568 |
Product | fimbrial usher protein |
Protein accession | YP_002046203 |
Protein GI | 194450978 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3188] P pilus assembly protein, porin PapC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0771751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAAGGA TGACGCCCAT CGCTTCGCTT GTTTTATTGA CTCTGTTTAC CTGGCAAACG CAGGCTATCG CGACGGAAAC GTTTGATACC CATTTTATGG TGGGGGGAAT GAGAGATCAA AAAATAACAA ATTTCCATCT GGATGAGAAT AAGCCAATTC CGGGACAGTA CGAACTGGAT ATTTATGTCA ACAATCAATG GCGAGGTAAA TACGATATCA TTGTTGCCGA TGATCCCGGT AGCACGTGTA TTTCAACTGA GTTGTTGAAA AATATTGGTG TGATAAGCGA TGGTCTGCAA CCGCAGGGAG CAACGGATTG TATTGCGTTA AAAGATGTCG TGAGAAGCGG TGGCTATACT TTTAATATTG GCGTTTTTCG GCTGGATTTG AGCGTTCCCC AGGCCTATGT AAATGAGGTC GAGGCGGGTT ATGTATTGCC TGAAAACTGG GATCGCGGCA TCAATGCATT TTATACTTCT TACTATGCCA GCCAGTATTA CAGTGACTAT AAGAATTCTG GCAGTAGTGA AAGTACTTAC GTTCGGTTCA ATAGCGGTTT CAATCTGTTG GGCTGGCAAG CGCATGCGGA TACCACATTT AATAAAACCG ATGGCAGCAG CGGTGAGTGG AAAAGCAACA CATTGTATCT GGAGCGCGGT ATCGCTGAGC TCCTCGGCAC ATTACGCGCC GGGGATCAGT ATACCTCGTC AGAGATTTTT GATTCTGTGA GATTTACCGG CGTTCGCCTG TTCCGCGATA TGCAAATGTT GCCAAACTCG AAACAGAATT TTACGCCGTT GGTGCAGGGG ATTGCACAGA CTAACGCTTT GGTAACCATC GAACAGAACG GATTCGTTGT TTATCAGAAA GAGGTTCCTC CTGGCCCCTT TTCCATTGCG GATCTGCAAC TCGCGGGCGG TGGCGCGGAT CTTGATGTCA CCGTGCGTGA GGCGGATGGT TCGATAAATA CCTGGCTGGT GCCTTACGCT TCCGTACCGA ACATGTTGCA GCCTGGCGTC TCTAAGTATG ATTTTTCCGC CGGCCGTAGT CATATTGAAG GCGCCGATAA TCAGGCCGAT TTTACACAAA TCAGTTATCA GTATGGCCTT AATAACCTGT TGACGCTTTA TGGCGGTACG ATGCTATCGA ACCATTATAA TGCGTTTACC CTCGGCACGG GGTGGAATAC CCGGATTGGC GCCATTTCGC TTGACGCTAC GCGAGCGCAC AGTAAACAGG ATAATGGCGA TGTATTTGAT GGTCAGAGTT ATCAGATTGC TTATAATAAA TACCTGACCC AAACATTAAC TCGGTTTGGT CTGGCTGCGT ATCGGTATTC ATCACAGGAT TACCGCACAT TTAACGATCA TGTCTGGGCC AATAATAAAA ATAACTATCG TCGCGATAAG AATGATGTAT ACGATATTGC TGATTATTAT CAAAACGATT TTGGGCGTAA AAATACGTTT TCAGCTAATG TGAGCCAATC CTTGCCAGAA GGATGGGGCG CAGTATCACT GAGTGCATTA TGGCGTGATT ACTGGGGACG TAGCGGCACC AGTAAAGATT ATCAAATAAG CTATTCCAAT ACGTTCCAGA AAATTAATTA TACGTTATCC GCCAGTCAGA CTTACGACGA GGATCATAAT GAAGATAAAC GTTTTAACCT GTTTATTTCA ATTCCCTTTG ACTGGGGGGA CGGTATTACT ACCCCGCGGC GTCATCTGAA TGTGTCGAAC TCGACGACCT TTGATGATGA TGGATTTACC TCAAACAATA TTGGTTTAAC CGGTACGGCA GGCAGTCGCG ATCAATTTAA TTACGGCGTG AATGTTAGTC ATCAGCGACA GGATAGTGAG ACCACAGCGG GGACGAATTT AACCTGGAAT ACGCCCGTTG CAACGCTTAA TGGTAGTTAC AGCCAGTCGT CCAATTATAC TCAGACCGGC GGAAGTATTT CCGGTGGGGT TGTAGCCTGG AGTGGCGGGT TGAATTTATC CAGCCGGCTT TCAGATACCT TTGCGATTAT GCAGGCTCCG GGACTTGAAG GAGCCTACGT TAACGGCCAA AAATATCGGA CCACCAATAA AAAAGGAACG GTGGTTTATG ACAACCTTAC GCCATATCGC GAAAACCATC TTATGCTTGA TGTGTCGCAA AGTAGCAGTG AAACGGAATT ACGCGGTAAC CGTAAAGTTG CCGCCCCGTA CCGAGGGGCC GTCGTGCTAG TGAATTTTGA TACCGACCAG CGTAAACCAT GGTTTATTAA AGCGCAGCGT CCTGATGGTT CGCCTCTTAT TTTTGGTTAT GATGTAGTAG ATCATCATGG TCATAATGTG GGCATTGTTG GACAAGGTAG TCAGCTATTT ATTCGAACGA ATGATATTCC GCCCGAAGTC AGTGTACCAG TAGATAAAGA GCAGGGGCTT TCATGTTCAA TCACCTTTGG TAAAACGGTT GATGAAAGTA AAGTTTATAT TTGTCGGTAG
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Protein sequence | MLRMTPIASL VLLTLFTWQT QAIATETFDT HFMVGGMRDQ KITNFHLDEN KPIPGQYELD IYVNNQWRGK YDIIVADDPG STCISTELLK NIGVISDGLQ PQGATDCIAL KDVVRSGGYT FNIGVFRLDL SVPQAYVNEV EAGYVLPENW DRGINAFYTS YYASQYYSDY KNSGSSESTY VRFNSGFNLL GWQAHADTTF NKTDGSSGEW KSNTLYLERG IAELLGTLRA GDQYTSSEIF DSVRFTGVRL FRDMQMLPNS KQNFTPLVQG IAQTNALVTI EQNGFVVYQK EVPPGPFSIA DLQLAGGGAD LDVTVREADG SINTWLVPYA SVPNMLQPGV SKYDFSAGRS HIEGADNQAD FTQISYQYGL NNLLTLYGGT MLSNHYNAFT LGTGWNTRIG AISLDATRAH SKQDNGDVFD GQSYQIAYNK YLTQTLTRFG LAAYRYSSQD YRTFNDHVWA NNKNNYRRDK NDVYDIADYY QNDFGRKNTF SANVSQSLPE GWGAVSLSAL WRDYWGRSGT SKDYQISYSN TFQKINYTLS ASQTYDEDHN EDKRFNLFIS IPFDWGDGIT TPRRHLNVSN STTFDDDGFT SNNIGLTGTA GSRDQFNYGV NVSHQRQDSE TTAGTNLTWN TPVATLNGSY SQSSNYTQTG GSISGGVVAW SGGLNLSSRL SDTFAIMQAP GLEGAYVNGQ KYRTTNKKGT VVYDNLTPYR ENHLMLDVSQ SSSETELRGN RKVAAPYRGA VVLVNFDTDQ RKPWFIKAQR PDGSPLIFGY DVVDHHGHNV GIVGQGSQLF IRTNDIPPEV SVPVDKEQGL SCSITFGKTV DESKVYICR
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