Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C2357 |
Symbol | mdtB |
ID | 6488042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 2263114 |
End bp | 2266236 |
Gene Length | 3123 bp |
Protein Length | 1040 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642742544 |
Product | multidrug efflux system subunit MdtB |
Protein accession | YP_002046179 |
Protein GI | 194447453 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.758009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGTAT TACCTCCGGG CAGCACGGGC GGCCCCTCGC GTCTGTTTAT TCTGCGCCCC GTGGCCACCA CTCTGCTGAT GGCGGCGATT TTACTCGCCG GGATTATCGG CTATCGCTTC CTGCCCGTCG CCGCTTTGCC GGAGGTCGAC TACCCCACTA TTCAGGTTGT TACGCTCTAC CCTGGCGCCA GCCCGGATGT CATGACCTCC GCCGTCACCG CGCCGCTTGA GCGCCAGTTC GGCCAGATGT CAGGACTGAA GCAGATGTCG TCGCAAAGTT CCGGCGGCGC ATCGGTGGTG ACGCTACAGT TTCAGTTGAC GCTGCCGCTG GACGTTGCCG AGCAGGAAGT ACAGGCGGCG ATTAACGCAG CCACCAATTT ATTGCCTTCC GACCTGCCGA ATCCGCCGAT TTATAGCAAA GTCAATCCGG CGGACCCGCC GATTATGACG CTTGCCGTCA CCTCAAACGC AATGCCGATG ACCCAGGTAG AGGACATGGT AGAAACCCGC GTGGCGCAGA AGATCTCGCA GGTCTCCGGC GTCGGACTGG TGACGCTTGC CGGCGGGCAG CGCCCTGCGG TACGCGTAAA ACTGAATGCT CAGGCTGTCG CCGCGCTCGG TCTGACCAGC GAAACGGTCC GTACCGCAAT TACCGGCGCC AACGTCAACT CGGCGAAAGG CAGTCTGGAT GGCCCCGAAC GGGCGGTGAC GCTTTCTGCT AACGATCAGA TGCAGTCTGC CGACGAATAC CGCAGGCTTA TCATCGCGTA TCAAAACGGC GCGCCGGTAC GGCTGGGCGA TGTCGCCACC GTCGAACAGG GTGCGGAAAA TAGCTGGCTC GGCGCATGGG CGAATCAAGC GCCGGCTATC GTGATGAATG TTCAACGCCA GCCTGGCGCC AATATCATTG CGACAGCGGA CAGCATTCGC CAGATGCTGC CCCAGCTTAC CGAAAGCCTG CCGAAATCGG TGAAGGTCAC GGTCCTGTCC GATCGCACCA CCAATATTCG CGCTTCCGTG CGCGATACCC AGTTTGAACT GATGCTGGCG ATCGCGCTGG TCGTCATGAT TATCTATCTG TTTTTACGTA ACATTCCCGC CACAATTATT CCCGGCGTCG CCGTACCGCT GTCGCTTATC GGCACCTTTG CGGTGATGGT GTTTTTGGAT TTTTCCATTA ATAACCTGAC GCTGATGGCG CTCACTATCG CCACGGGTTT CGTGGTGGAC GATGCGATTG TGGTGATCGA GAACATCTCG CGCTACATCG AAAAAGGAGA AAAACCGCTG GCGGCGGCGC TCAAAGGCGC GGGCGAAATC GGCTTTACCA TTATTTCCCT CACCTTTTCC CTGATTGCGG TGCTGATCCC GTTGCTCTTT ATGGGCGATA TTGTTGGTCG ACTGTTCCGC GAATTTGCGG TGACGTTGGC GGTAGCGATT TTAATCTCCG CCGTCGTCTC TTTGACGCTC ACGCCCATGA TGTGCGCGCG TATGCTCAGC CAGCAGTCTC TGCGTAAACA AAACCGCTTT TCCCGCGCCT GCGAGCGGAT GTTTGACCGC GTGATCGCCA GCTACGGACG TGGATTAGCG AAAGTGCTCA ACCATCCGTG GCTTACATTG AGCGTGGCAT TCGCCACGCT CCTGCTCAGC GTTATGCTGT GGATAGTCAT TCCGAAAGGG TTCTTTCCGG TACAGGATAA CGGCATTATC CAGGGAACGC TGCAGGCGCC GCAATCGTCA TCGTATGCCA GTATGGCGCA ACGTCAGCGC CAGGTGGCGG AGCGGATATT ACAGGACCCG GCGGTGCAAA GCCTGACGAC TTTTGTTGGC GTAGACGGCG CTAACCCCAC GCTCAATAGC GCGCGCCTGC AAATTAACCT CAAGCCGCTG GATGCGCGTG ATGACCGCGT GCAGCAGGTG ATCTCCCGGC TGCAAACCGC CGTGGCGACG ATTCCCGGCG TGGCGCTGTA TCTCCAGCCG ACGCAGGATT TAACCATCGA CACTCAGGTC AGCCGCACGC AGTATCAGTT TACCCTGCAG GCCACGACGC TCGATGCGCT CAGCCACTGG GTGCCAAAAC TGCAGAACGC GCTACAGTCG TTACCACAGC TCTCTGAGGT AAGCAGCGAC TGGCAAGATC GAGGATTAGC GGCCTGGGTG AATGTCGACC GCGACAGCGC CAGCCGTCTG GGTATCAGCA TGGCGGATGT GGATAACGCG CTGTACAACG CGTTCGGACA ACGCCTGATT TCAACGATTT ATACCCAGGC GAACCAGTAC CGCGTCGTGC TGGAACATAA TACCGCCAGC ACGCCGGGCC TGGCGGCGCT GGAGACGATT CGCCTGACGA GCCGCGACGG CGGCACCGTA CCGCTCAGCG CGATTGCCCG CATTGAGCAG CGCTTCGCCC CGCTCTCCAT CAATCATTTA GATCAGTTCC CGGTCACGAC ATTTTCGTTT AACGTGCCGG AGGGCTATTC GCTCGGCGAT GCGGTGCAGG CGATTCTCGA TACGGAAAAA ACGCTCGCCC TGCCAGCGGA TATTACAACG CAGTTTCAGG GTAGTACGCT CGCCTTCCAG GCGGCGCTGG GCAGCACCGT CTGGCTTATT GTCGCCGCCG TGGTGGCGAT GTATATCGTG CTCGGCGTGC TGTATGAGAG TTTTATCCAT CCGATCACTA TTCTCTCAAC GCTGCCTACG GCGGGCGTCG GCGCGCTGCT GGCGCTGATC ATCGCTGGTA GCGAGCTCGA TATTATCGCC ATTATCGGCA TTATTTTGCT GATCGGCATC GTGAAGAAAA ACGCCATCAT GATGATTGAC TTCGCCCTCG CCGCCGAACG CGAACAGGGG ATGAGTCCGC GCGACGCTAT CTTCCAGGCC TGTCTGCTGC GTTTTCGACC GATTCTGATG ACCACGCTGG CGGCGTTGCT CGGGGCATTG CCATTAATGT TGAGTACCGG CGTTGGCGCG GAATTACGTC GCCCGTTGGG GATCGCGATG GTGGGCGGCC TACTGGTCAG CCAGGTATTA ACTCTGTTTA CCACACCGGT GATTTATCTC CTGTTTGACC GCCTGTCGCT GTACGTGAAA AGTCGCTTTC CGCGCCATAA AGAGGAGGCG TAG
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Protein sequence | MQVLPPGSTG GPSRLFILRP VATTLLMAAI LLAGIIGYRF LPVAALPEVD YPTIQVVTLY PGASPDVMTS AVTAPLERQF GQMSGLKQMS SQSSGGASVV TLQFQLTLPL DVAEQEVQAA INAATNLLPS DLPNPPIYSK VNPADPPIMT LAVTSNAMPM TQVEDMVETR VAQKISQVSG VGLVTLAGGQ RPAVRVKLNA QAVAALGLTS ETVRTAITGA NVNSAKGSLD GPERAVTLSA NDQMQSADEY RRLIIAYQNG APVRLGDVAT VEQGAENSWL GAWANQAPAI VMNVQRQPGA NIIATADSIR QMLPQLTESL PKSVKVTVLS DRTTNIRASV RDTQFELMLA IALVVMIIYL FLRNIPATII PGVAVPLSLI GTFAVMVFLD FSINNLTLMA LTIATGFVVD DAIVVIENIS RYIEKGEKPL AAALKGAGEI GFTIISLTFS LIAVLIPLLF MGDIVGRLFR EFAVTLAVAI LISAVVSLTL TPMMCARMLS QQSLRKQNRF SRACERMFDR VIASYGRGLA KVLNHPWLTL SVAFATLLLS VMLWIVIPKG FFPVQDNGII QGTLQAPQSS SYASMAQRQR QVAERILQDP AVQSLTTFVG VDGANPTLNS ARLQINLKPL DARDDRVQQV ISRLQTAVAT IPGVALYLQP TQDLTIDTQV SRTQYQFTLQ ATTLDALSHW VPKLQNALQS LPQLSEVSSD WQDRGLAAWV NVDRDSASRL GISMADVDNA LYNAFGQRLI STIYTQANQY RVVLEHNTAS TPGLAALETI RLTSRDGGTV PLSAIARIEQ RFAPLSINHL DQFPVTTFSF NVPEGYSLGD AVQAILDTEK TLALPADITT QFQGSTLAFQ AALGSTVWLI VAAVVAMYIV LGVLYESFIH PITILSTLPT AGVGALLALI IAGSELDIIA IIGIILLIGI VKKNAIMMID FALAAEREQG MSPRDAIFQA CLLRFRPILM TTLAALLGAL PLMLSTGVGA ELRRPLGIAM VGGLLVSQVL TLFTTPVIYL LFDRLSLYVK SRFPRHKEEA
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