Gene SeHA_C1980 details

Gene Information

• Locus tag: SeHA_C1980
• Symbol: pth
• ID: 6487862
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Heidelberg str. SL476
• Kingdom: Bacteria
• Replicon accession: NC_011083
• Strand: +
• Start bp: 1928925
• End bp: 1929509
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 642742185
• Product: peptidyl-tRNA hydrolase
• Protein accession: YP_002045828
• Protein GI: 194450126
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0193] Peptidyl-tRNA hydrolase
• TIGRFAM ID: [TIGR00447] peptidyl-tRNA hydrolase

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0660178
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 83
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGCAATTA AATTGATTGT TGGTCTGGCG AATCCCGGTG CGGAATATGC CGCGACGCGA 
CACAATGCAG GCGCATGGTA CGTCGATTTA CTGGCGGAGC GCCTGCGCGC GCCGTTGCGT 
GAAGAGCCTA AATTCTTTGG CTATACCTCA CGCATCACGC TGGAAGGGGA AGATGTTCGC 
CTGCTGGTAC CCACCACGTT CATGAATCTC AGTGGTAAAG CAGTTGGCGC AATGGCCAGT 
TTTTACCGTA TTCAGCCGGA CGAAATTCTG GTCGCTCACG ACGAGCTGGA TCTCCCTCCG 
GGCGTGGCGA AATTTAAACT TGGCGGCGGC CACGGCGGCC ACAATGGCCT GAAAGACATC 
ATCAGCAAGC TGGGCAATAA TCCCAACTTT CACCGCTTAC GCGTTGGAAT TGGTCATCCA 
GGCGATAAAA GTAAAGTTGT TGGTTTCGTA CTGGGTAAAC CCCCTGTTTC TGAACAAAAA 
TTAATTGATG AGGCCATTTA CGAAGCGGCA CGCTGTACGG AATTGTGGTT CAAAGAGGGT 
CTGGCCAAAG CAACAAGCCG TTTGCATACC TTTAAGGCGC AATAA 

 

Protein sequence

MAIKLIVGLA NPGAEYAATR HNAGAWYVDL LAERLRAPLR EEPKFFGYTS RITLEGEDVR 
LLVPTTFMNL SGKAVGAMAS FYRIQPDEIL VAHDELDLPP GVAKFKLGGG HGGHNGLKDI 
ISKLGNNPNF HRLRVGIGHP GDKSKVVGFV LGKPPVSEQK LIDEAIYEAA RCTELWFKEG 
LAKATSRLHT FKAQ