Gene SeHA_C1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1873 
SymbolpspD 
ID6492260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp1828676 
End bp1828894 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content57% 
IMG OID642742086 
Productperipheral inner membrane phage-shock protein 
Protein accessionYP_002045731 
Protein GI194451816 
COG category 
COG ID 
TIGRFAM ID[TIGR02979] phage shock protein PspD 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.00958993 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATACTC GCTGGCAACG CGCCGGGCAG AAGGTGAAGC CCGGCTTCAA AATAGCAGGT 
AAGCTGGTTC TGTTGACCGC GTTACGCTAC GGGCCTGCCG GCGTGGCGGG ATGGGCGGTA 
AAATCCGTCG CCCGTCGTCC GCTAAAAATG TTGCTGGCGT TTGCGCTGGA GCCAGTACTT 
CGTAAGGCGG CGAATAAAAT TTCGCAGCGT TACAAATAG
 
Protein sequence
MNTRWQRAGQ KVKPGFKIAG KLVLLTALRY GPAGVAGWAV KSVARRPLKM LLAFALEPVL 
RKAANKISQR YK