Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C1766 |
Symbol | |
ID | 6489210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 1722756 |
End bp | 1724876 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642741983 |
Product | TonB-dependent receptor yncD |
Protein accession | YP_002045628 |
Protein GI | 194450154 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 89 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTA TTTCCGTTAG ACAGCGACTT TATCCCGCCC TCTTATTGCC TCTGACCTTC TCCCCGGTCC TTCAGGCCGC CAGCGCGCCC AATGAACAAA CCATGATAGT CACCGCAACG CCGCAAACCG TATCCGAACT GGATACACCT GCCGCCGTTA GCGTCATTGA GGGAGAAGAC ATGCGTCTGG CGACGCCGCG CGTTAATTTA TCTGAGACTT TAACCAGCGT CCCGGGATTG CAGGTGCAGA ACCGGCAGAA CTACGCGCAG GATCTGCAAA TCTCTATCCG TGGATTTGGC TCGCGTTCCG CCTTTGGCGT GCGCGGCATT CGTCTGTATG TTGATGGCAT TCCCGCCACC ATGCCGGATG GACAAGGCCA GATTTCGAAT ATTGATATTA ACAGCATACA AGACGTTGAA GTGTTACGCG GCCCCTTCTC AGCGCTATAC GGCAATGCTT CCGGCGGCGT AATAAATGTC ACCACCGAAA CCGGGAGACA ACCGCCCACC CTTGAGGCCA GCAGCTACTA CGGCAGTTAT GGAAGCTGGC GCTATGGGCT AAAAGCCACG GGCGCGATGG GTGACGGCAC ACAGCCAGGC GACGTGGATT ACACGGTATC AACTACCCGT TTCACCACCC ACGGCTACCG CGATCACAGC GGCGCGCGAA AAAATCTGGC TAATGCCAAA CTGGGCGTGC GCCTTGACGA TGTCAGTAAA CTTTCGCTGA TTTTTAATAG TGTGGATATT AAGGCGGACG ATCCCGGTGG ACTTACCGAA TCTGAATGGA AAGCCGATCC GCAACAGGCG CCGCGCGCTG AACAGTACAA TACGCGTAAA ACCATCAAAC AAACTCAGGC AGGATTGCGT TATGAACGTC AGCTCAGCGC GCAGGATGAT ATCAGCGTGA TGGCCTACGC CGGAGAGCGG GAAACCACGC AATACCAGTC TATTCCCCTG GTGGCACAGC TAAAACCGGC CCAGGCTGGC GGCGTAATTA CACTGCAACG CCACTATCAG GGCATTGATT CCCGCTGGAC TCACCGGGGA GAATTAGGTG TGCCGGTCAC CTTCACTGGC GGAGTAAACT ATGAAAACAT GAGCGAAAAC CGCAAGGGTT ACAATAATTT CCGTCTCAAC AACGGCACCC CTGAGTTTGG GCATAAAGGC GATTTACGGC GGGATGAGCG TAACCTGATG TGGAATGTCG ATCCTTATCT GCAAACCCAG TGGCAGCTTA CGCAAAAACT CTCGCTGGAT GCTGGCGTGC GCTACAGTTC CGTGTGGTTC GATTCTAACG ATCACTATAT CGCGCCCGGC AATGGCGATG ACAGCGGCGA CGCCAGCTAT CACCACTGGC TACCCGCCGG ATCGCTAAAA TATGCGTTAA CTGACGCCTG GAATCTCTAT CTTGCTGCCG GTCGCGGATT TGAAACTCCC ACTATCAATG AACTTTCTTA TCGCGCTGAC GGCCAAAGCG GGTTCAACTT TGACCTCAAA CCGTCGACCA ATGATACGGT GGAAGTCGGC AGTAAAACGC GGATTGGCAA TGGCTTGTTG ACCGCCGCGT TATTTCAAAC CGATACCGAT GATGAAATTG TTGTCGCCAG CAGTATGGGA GGACGCACTA CCTACAAAAA CGCGGGCAAA ACGCGCCGCC AGGGCGCAGA GCTCGCGTTG GACCAGCGCT TCGCCGGCGA CTGGCGGGTG AAAGCATCAT GGACCTGGCT GGATGCGACC TATCGCAGTA ACGTTTGTCG GGGGCAAAAC TGTGATGGAA ACCGGATGCC TGGCATCGCC CGTAATATGG GATTCGCCTC ATTAGGTTTT ATCCCGGATG AGGGGTGGTA CGCCGGAACA GACGTTCGGT ATATGGGCGA TATCATGGCC AATGATGAAA ATACCGCCAA AGCGCCTTCG TATACCGTTG TTGGACTAAA TACAGGGTAT AAATTTAATT ACAGCCAGCT TACCGTCGAT ATTTTTGGGC GGGTAGATAA TCTATTTGAT AAAGAATATA TCGGTTCGGT GATCGTTAAT GAATCTAATG GCCGATATTA TGAGCCAGCG CCAGGGCGTA ACTATGGCGT GGGGATTAAT CTGGCATGGC GATTTGAATA A
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Protein sequence | MKIISVRQRL YPALLLPLTF SPVLQAASAP NEQTMIVTAT PQTVSELDTP AAVSVIEGED MRLATPRVNL SETLTSVPGL QVQNRQNYAQ DLQISIRGFG SRSAFGVRGI RLYVDGIPAT MPDGQGQISN IDINSIQDVE VLRGPFSALY GNASGGVINV TTETGRQPPT LEASSYYGSY GSWRYGLKAT GAMGDGTQPG DVDYTVSTTR FTTHGYRDHS GARKNLANAK LGVRLDDVSK LSLIFNSVDI KADDPGGLTE SEWKADPQQA PRAEQYNTRK TIKQTQAGLR YERQLSAQDD ISVMAYAGER ETTQYQSIPL VAQLKPAQAG GVITLQRHYQ GIDSRWTHRG ELGVPVTFTG GVNYENMSEN RKGYNNFRLN NGTPEFGHKG DLRRDERNLM WNVDPYLQTQ WQLTQKLSLD AGVRYSSVWF DSNDHYIAPG NGDDSGDASY HHWLPAGSLK YALTDAWNLY LAAGRGFETP TINELSYRAD GQSGFNFDLK PSTNDTVEVG SKTRIGNGLL TAALFQTDTD DEIVVASSMG GRTTYKNAGK TRRQGAELAL DQRFAGDWRV KASWTWLDAT YRSNVCRGQN CDGNRMPGIA RNMGFASLGF IPDEGWYAGT DVRYMGDIMA NDENTAKAPS YTVVGLNTGY KFNYSQLTVD IFGRVDNLFD KEYIGSVIVN ESNGRYYEPA PGRNYGVGIN LAWRFE
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