Gene SeHA_C1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1728 
Symbol 
ID6492422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp1677595 
End bp1678503 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content53% 
IMG OID642741947 
ProductLysR substrate binding domain-containing protein 
Protein accessionYP_002045592 
Protein GI194448912 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTGA ATATGCTGGA AGCCATGAAT ATTTATGTCA ATGTGGTAGA GCAAGGGAGC 
TTTATCCGCG CGGCGGAGGT GCTTGAACTG CACCGCCCTG CTGTTACCCG CGCCGTTCAG 
AATCTGGAAC ATGATCTGGG CGTTAAGCTC CTGCATCGCA CAACACGACA GGTCAGTATG 
ACGGATGAAG GGGAAGAGTT TTACCAGCGT TGCCTGTCGC TCTTAAGCGA GCTGGACGAC 
GTCCGGCGAT TATTTTCCAG CACGCAACCG CCGAAAGGCC GCCTGCGCCT TGACGTCCCT 
ATTACGCTCG CCCGGGCAGT CATCATTCCG GCTCTTGGCG ATTTTCAGAA CCGATACCCG 
GATATTGAGA TTGTACTTGG CACGTCCGAT CGCAAGATTG ATTTGATTGC CGAGCGTGTG 
GACTGCGTCA TCCGACTTGG TGAGCTTAAT GACTCCAGTT TTGTTGCCAG ACGTCTGGGA 
ACGGCAGCCA TGGTGACTTG TGCTGCGCCA TCTTATCTTG CGAAGCATGG CACGCCGCAC 
TCTATCGATG AGCTGATGAA GTCCCACCGG GCTGTAAATT TTTTCAGTAA TCACAGCCTG 
CAGATAATGG AGTGGAAATT CACGGTTGAT GGCAGTATCG CGTCAATAAA AATTCCCTCC 
AGCATCCTGG TAGACAATTC AGAAGCGTTT CTTTCATGCG GGCTTGCGGG GTTGGGTGTT 
CTACACGGAT TGCGTCCGTC TCTTGCACCC TTTATTGCTA GTGGAGAGCT GACAGAGATC 
CTCACTGATT TCCCGCCCCC GCCAAAACCG GTTTCACTGC TTTACCCGGA TCGTCGGTAT 
CTGGCACCTA AAGTCCGCGT ATTCATCGAC TGGCTGTGCG AGGTTTTTGG TCCGGATGCA 
CATCTCTGA
 
Protein sequence
MQLNMLEAMN IYVNVVEQGS FIRAAEVLEL HRPAVTRAVQ NLEHDLGVKL LHRTTRQVSM 
TDEGEEFYQR CLSLLSELDD VRRLFSSTQP PKGRLRLDVP ITLARAVIIP ALGDFQNRYP 
DIEIVLGTSD RKIDLIAERV DCVIRLGELN DSSFVARRLG TAAMVTCAAP SYLAKHGTPH 
SIDELMKSHR AVNFFSNHSL QIMEWKFTVD GSIASIKIPS SILVDNSEAF LSCGLAGLGV 
LHGLRPSLAP FIASGELTEI LTDFPPPPKP VSLLYPDRRY LAPKVRVFID WLCEVFGPDA 
HL