Gene SeHA_C1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1718 
Symbol 
ID6491282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp1671319 
End bp1671807 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content49% 
IMG OID642741940 
ProductMarR family transcriptional regulator 
Protein accessionYP_002045585 
Protein GI194451303 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.106363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAA ATAAAAATGT GCAAGATGCA CATATTTCCG AGCAAATGAA GGCGCTTCAC 
GGTGCGTTGA TTCGCGTGGT GAGCGCGCTC AACCGGCCTC GTAATGATGA GAAATTAATT 
GCAGAGGCGG GCATTCAACT CGATCGCGCG CTATTTTCGA TCCTTATTAG TATCGAACGT 
TTAGGGCCGA TTGGCGTTGT TGAGTTAGCC GAACGTGCCG GTCGTGATTA TACGACGGTA 
AGCCGACAGG TCGCCAAACT GGAGAAGCTG GGGTTGATAA TACGGCAGCA TAATGCCATC 
GATCGTCGTA TACGCGAGGC CGTTATCTCC CGGACAGGAA AGGCGATGAC GGAGCGTATA 
GACGCTGCGC GAGAGCAAAT GGGCAACGTT GTTTTTAAAG ACTGGCCTCA GGATGAAATT 
GATATCTTTG TTCGGTTAAT GCAAAAGTTT GCCGATGCAA TGGATAGCGA TGCTTCAATG 
CCGGAATAA
 
Protein sequence
MSENKNVQDA HISEQMKALH GALIRVVSAL NRPRNDEKLI AEAGIQLDRA LFSILISIER 
LGPIGVVELA ERAGRDYTTV SRQVAKLEKL GLIIRQHNAI DRRIREAVIS RTGKAMTERI 
DAAREQMGNV VFKDWPQDEI DIFVRLMQKF ADAMDSDASM PE