Gene SeHA_C1688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1688 
Symbol 
ID6487787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp1641552 
End bp1642739 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content52% 
IMG OID642741911 
Productputative MFS-type transporter YdeE 
Protein accessionYP_002045556 
Protein GI194449935 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.165039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCAG GATTGAGACG TTCGACGTTG GCTCTACTCG CCTCATCGCT GTTATTGACA 
ATTGGACGCG GCGCCACGCT CCCCTTTATG ACCATCTATC TTAACCGTCA GTACGGTTTA 
GGCGTGGATC TGATTGGCTA CGCGCTGACC AGCGCGTTAA CGATTGGCGT CGTCTTTAGT 
CTTGGCTTTG GGATTCTGGC GGACAAGTTT GATAAAAAGC GCTACATGTT ACTCGCGATT 
ATCGCCTTCG CCTGCGGATT TATCGCCATC CCAATGGTGC ATAATGTCGT ACTGGTTGTC 
CTGCTTTTTG CGCTTATTAA CTGCGCCTAT TCGGTTTTTT CTACCGTCCT GAAGGCCTGG 
TTCGCCGATA ATCTCACCGC GACAACAAAA ACACGGATTT TTTCGCTCAA CTATACCGTA 
CTCAATATCG GCTGGACGGT TGGCCCGCCG CTCGGCACGC TGCTGGTGAT GCAAAGCATC 
AATTTACCCT TCTGGCTTGC CGCCATCTGC TCCGCATTTC CGCTGGTCTT TATTCAGGTA 
TGGGTGACAC GTTCGGTTGC CGCCAGCGAG GGGAAAAATG CCGCTATCTG GTCTCCCTCC 
GTTCTGCTGC GCGACAAAGC ATTATTGTGG TTTACGCTTT CGGCATTTCT GGCCTCCTTT 
GTGGGGGGCG CCTTTGCGTC CTGTATTTCA CAGTACGTTA TGGTCGTTGC CGATAGCGGC 
TTCGCGGAAA AAGTGGTAGC CGTCGTCCTG CCGGTTAATG CGGTTATTGT GGTCAGTTTG 
CAATACGCCG TGGGCCGTCG ACTTACCGCC GTCAATATTC GACCAATGAT GACGACCGGC 
ACCGTCTTTT TTATCGCCGG GCTCATCGGA TTTATTTTTT CAGGCGACAA TCTGTTTTTT 
TGGGGGCTTT CAGCGGCAGT ATTCACGATT GGCGAAATTA TTTATGCCCC CGGCGAATAT 
ATGTTAATTG ACAACATTGC GCCTGCCGGG ATGAAAGCCA GCTATTTTTC AGCGCAATCG 
CTGGGCTGGC TGGGTGCGGC GGTAAACCCG CTGGCCAGCG GCGTCATCTT GACGACGCTT 
CCAGCCTGGT CGCTTTTCGT TGTCCTGATA ATCGCCATTG TGTTCGCCTG GGCACTGATG 
TTAAAAGGAA TGCGGATTAC CCCTACGCAA CAGGCTATTA CCTGTTAA
 
Protein sequence
MNPGLRRSTL ALLASSLLLT IGRGATLPFM TIYLNRQYGL GVDLIGYALT SALTIGVVFS 
LGFGILADKF DKKRYMLLAI IAFACGFIAI PMVHNVVLVV LLFALINCAY SVFSTVLKAW 
FADNLTATTK TRIFSLNYTV LNIGWTVGPP LGTLLVMQSI NLPFWLAAIC SAFPLVFIQV 
WVTRSVAASE GKNAAIWSPS VLLRDKALLW FTLSAFLASF VGGAFASCIS QYVMVVADSG 
FAEKVVAVVL PVNAVIVVSL QYAVGRRLTA VNIRPMMTTG TVFFIAGLIG FIFSGDNLFF 
WGLSAAVFTI GEIIYAPGEY MLIDNIAPAG MKASYFSAQS LGWLGAAVNP LASGVILTTL 
PAWSLFVVLI IAIVFAWALM LKGMRITPTQ QAITC