Gene SeHA_C1656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1656 
Symbol 
ID6491193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1609841 
End bp1611094 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content55% 
IMG OID642741879 
Productinner membrane transport protein YnfM 
Protein accessionYP_002045524 
Protein GI194451340 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCGTA CAACTATTCT CGATGACGCC ACGGCGAGCG ATATCGATGA ACAACGCCAT 
TCTCAGCCGG TTCAATTTAT TAAACGCGGT ACAGCGCCTT TCATGCGCGT CACGCTGGCC
CTTTTTTCCG CGGGCCTGGC GACTTTCGCG CTCCTTTATT GCGTTCAGCC TATACTACCG
GTACTTTCCC AGGAGTTTGG CGTCTCCCCC GCCAGCAGCA GCGTTTCACT TTCTATTTCT
ACCGCCATGC TGGCTATCGG CTTACTTTTT ACCGGCCCGC TTTCTGATGC GATAGGCCGT
AAACCGGTGA TGGTCACCGC CTTGTTATTA GCCTCCTGCT GCACATTGTT ATCAACCATG
ATGACCAGCT GGCATGGTAT TCTGATTATG CGTGCGCTGA TCGGTCTGTC GTTAAGCGGC
GTCGCCGCGG TGGGAATGAC CTACCTGAGT GAAGAAATCC ATCCCAGCTT TGTCGCTTTC
TCCATGGGGC TCTATATTAG CGGTAATTCC ATCGGCGGGA TGAGCGGGCG TTTATTAAGC
GGCGTCATGA CCGACTTTTT TAACTGGCGC ATCGCGCTGG CGGCCATCGG ATGCTTTGCG
CTGGCGTCAG CACTGATGTT CTGGAAGATT TTACCCGCCT CGCAACATTT CCGTCCCACG
TCGCTACGGC CTAAAACGCT ATTTATTAAT TTCCGTCTCC ACTGGCGCGA TCGGGGGTTA
CCTCTGCTGT TTGCGGAAGG CTTTTTACTG ATGGGCGCGT TCGTCACCCT GTTTAACTAC
ATTGGCTATC GCCTGATGCT CTCCCCCTGG GAATTAAGCC AGGCCGTGGT CGGACTGTTA
TCCGTAGCCT ATCTCACCGG CACATGGAGC TCGCCGAAAG CTGGCGCAAT GACCTCACGC
TATGGCCGGG GGCCGGTGAT GCTGTTCTCT ACCGCAGTAA TGCTGGGTGG GCTTTTACTG
ACGCTTTTTA CCTCGCTTTG GCTGATTTTT GCCGGGATGC TGCTTTTTTC CGCCGGCTTT
TTCGCCGCGC ACTCCGTGGC CAGTAGTTGG ATTGGCCCGC GTGCGCGCCG GGCGAAGGGA
CAGGCCTCGT CACTTTATCT TTTCAGCTAT TATCTGGGGT CCAGTATCGC CGGGACGCTA
GGCGGCGTAT TCTGGCATAG CTACGGCTGG AACGGCGTAG GTGGTTTTAT CGCGCTAATG
CTGGTGCTGG CCATCCTGGT CGGGACGCGG TTACATCATC GTCTTCACGC CTGA
 
Protein sequence
MSRTTILDDA TASDIDEQRH SQPVQFIKRG TAPFMRVTLA LFSAGLATFA LLYCVQPILP 
VLSQEFGVSP ASSSVSLSIS TAMLAIGLLF TGPLSDAIGR KPVMVTALLL ASCCTLLSTM
MTSWHGILIM RALIGLSLSG VAAVGMTYLS EEIHPSFVAF SMGLYISGNS IGGMSGRLLS
GVMTDFFNWR IALAAIGCFA LASALMFWKI LPASQHFRPT SLRPKTLFIN FRLHWRDRGL
PLLFAEGFLL MGAFVTLFNY IGYRLMLSPW ELSQAVVGLL SVAYLTGTWS SPKAGAMTSR
YGRGPVMLFS TAVMLGGLLL TLFTSLWLIF AGMLLFSAGF FAAHSVASSW IGPRARRAKG
QASSLYLFSY YLGSSIAGTL GGVFWHSYGW NGVGGFIALM LVLAILVGTR LHHRLHA