Gene SeHA_C1592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1592 
Symbol 
ID6491476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1540739 
End bp1543324 
Gene Length2586 bp 
Protein Length861 aa 
Translation table11 
GC content46% 
IMG OID642741815 
Producthelicase c2 
Protein accessionYP_002045460 
Protein GI194450167 
COG category[R] General function prediction only 
COG ID[COG1204] Superfamily II helicase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTCA AGACACCTTT TACCGGACCA TCTGTTCCAG AAACACCAGA CAAGCTTTTC 
AGAGAACTAA CCCGTAGGAA GTTTCCAGAT GTGTTACCTC ATCAGTCTGC CATGATGAAG
GATTACGCAG CGAAGGCCGT AAACATGACG GATGTGGCGC TACAACTACC CACTGGAAGC
GGAAAAACCC TCGTTGGTCT GCTGATAGCA GAATGGCGGC GCCGTAAATT CAAAGAAAGG
GTAGTTTATC TATGCCCGAC CAAACAATTA GTTTACCAAG TTGCTGAACA AGCAAACGAT
AAGTATGGCC TGTCTGTGGC CACTTTTGTT GGCAAGCAGA GGGACTTCTC ACCTGCTGAC
AAAGCCGACT ACCTCCAAGC TGAAAAGATA GCTATAACAA CATACTCTAG CCTGTTCAAT
ACGAATCCAT TTTTCGATCA AGCAGATATT ATATTTGTCG ACGATGCCCA TGCCAGCGAA
AATTATATAG CATCCCACTG GACGTTGCGC ATAGCCCGCC TAGATGATAG ATACAAGCCC
CTTCACCAAG CCTTATGTAA CGTGTTCTCG CCTCACTTAA CGCCCACAGA TTTGTCACGG
CTTCGAGGTG TTTGGGAAGA TGTAATAGAT CGCTCGTGGG TAGAGAAGCT TGCTACACCC
ACTTTGACTC AACTCACGCC ACAAATTGTC GAAATATTAG ATGCACACAC ACAAGGTACT
GATCTCGCCT ATCCTTGGTC ACTGATCCGA GGACATCTAG ATGCATGTCA TATATACCTA
TCCTCCCAAG AAATCCTGAT TCGCCCACTT TTACCTCCAA CGTTCTCACA TCCAGCGTTT
GAAAATGCAA AACAGCGTAT TTATATGTCA GCTACGTTAG GTGCTGGAGG AGATCTTGAA
CGTTTGGCAG GTAGAAAATC GATAACACGT CTACCGGCTC CGGACGGATG GGACACTCAA
GGTGTGGGTC GTCGGTTTTT CATCTTTCCA GAAATGTCAC TCACGCCCCA GCAAACTGTA
GCCTTGAGAA AAGAATTGAT GCAACGAGCT GGTCGAAGTG TTGTCCTCGT ACCAAGTGAT
AGAGATGCTG AGATGATCGC TTCAGAAGTT ACTCAGAATC TTAAGTATCC TGTTTTTCAC
GCGAGTGACA TCGAAGAATC AAAGGCTTCG TTTGTAAATT CTGAACAAGC AGTTGCTGTC
GTCGCAAACC GTTATGATGG AATTGACTTT GCGGGGGATG AATGCCGCTT GCTCTTTATT
GAGGGGCTTC CTAAAGCGAT GAACATTCAG GAGAGATTTC TCATGACGAG AATGGCTGCA
AACGCTCTCT ATAATGAACG AATTCAGACC CGTGTAGTAC AAGCAATCGG TCGCTGTACT
CGCTCTTTAG AAGACTACTC AGCTGTTGTT GTATCAGGAG AGGAGCTGCC TGATTACCTC
GCAGATCTTC GTCGCCGCCT TTTTTTTCAT CCAGAACTTC AGGCCGAGAT AACCTTTGGC
GCTCACCAAT CAAAGGACAC AGGACTTGCA GATCTGGTGG AGAACTTCGA GATTTTCCTT
GAAAATGATC GAAGTTGGGA ATTAGTAAAT AGACAAATCC TAGATGAACG TGATCGAGCT
CAGCAGCAAT TTCTGCCCGC TATCCAAGAA CTTGAAGAAG CTGTTGGTGC CGAAATCGAC
TATCAGACTG CTCTTTGGCG GCATGACTAC TATAGCGCCA TAGCTGCAGC TGACAGAGTT
CTAGGCACTT TGAAAGCGCC AGATCTTCGT GGTTATCGAG CTCTATGGAA TTATCTTGCT
GGTTCGGCTT GCTATCTAGC AGCACAAGCT GGCAACACAA CCATGGCAGC AAAATCAAGA
CAGTATTATC AAGACGCTCA CAAATGCGCT CCAAACATTC CCTGGCTGAC AGCCTTTGCC
CGCAAAGAAG TCGGAGATGC AGTAACTATT CAAGTAGATG ACATTGCGTT GCAACGCCAA
GTAGAAAACA TCGCCTCAGA GCTGACACGT CTGGGTGCTA CTCATGACCG TGATTTTGCT
AAATTAGAAC AGTCAATTCT CAGCGGACTA CAACATCATG AAACCTTTGA GCAAGCTCAA
AAAGAACTCG GAACACTGAT AGGATTTAAT GCAGGAAAAA TAGAAAGTGA AGGCTCTCCA
GATCCTTGGT GGATAGCAGA ATCTCAATGT ATCGTATTTG AAGACTATGT AAACACAACT
GATGGCACAT TGAGTGTTAC AAAAGCGAGG CAAGCAACAT CTCACCCAGA CTGGATGCGG
GCAAATGTTA AGGAATCTGC GGAGTGCGAG TTTCTGACTG TTCTAGTCAC ACCTGCAACC
AAGATCAGTG CTGCCGCGGT TGTTCATGCC TCGGGACTAC TCTACTGGAG ACTTGAAGAT
TTCCGATTAT TCGCAACTCA TGCTTTACAG ATAATCCGTC AACTTCGAAC AACCTTCTTC
GAGCAAGGAG ACTTAGTCTG GCAAGCTGAG GCCGCTGAAA TACTTAAGCA ACAGGGAATG
GACTTTGCCT CTATCAAAAG GGTAGTTACT GCCACCCCCG TTACCAAGTG CATGCAGGCA
ATCTAG
 
Protein sequence
MAFKTPFTGP SVPETPDKLF RELTRRKFPD VLPHQSAMMK DYAAKAVNMT DVALQLPTGS 
GKTLVGLLIA EWRRRKFKER VVYLCPTKQL VYQVAEQAND KYGLSVATFV GKQRDFSPAD
KADYLQAEKI AITTYSSLFN TNPFFDQADI IFVDDAHASE NYIASHWTLR IARLDDRYKP
LHQALCNVFS PHLTPTDLSR LRGVWEDVID RSWVEKLATP TLTQLTPQIV EILDAHTQGT
DLAYPWSLIR GHLDACHIYL SSQEILIRPL LPPTFSHPAF ENAKQRIYMS ATLGAGGDLE
RLAGRKSITR LPAPDGWDTQ GVGRRFFIFP EMSLTPQQTV ALRKELMQRA GRSVVLVPSD
RDAEMIASEV TQNLKYPVFH ASDIEESKAS FVNSEQAVAV VANRYDGIDF AGDECRLLFI
EGLPKAMNIQ ERFLMTRMAA NALYNERIQT RVVQAIGRCT RSLEDYSAVV VSGEELPDYL
ADLRRRLFFH PELQAEITFG AHQSKDTGLA DLVENFEIFL ENDRSWELVN RQILDERDRA
QQQFLPAIQE LEEAVGAEID YQTALWRHDY YSAIAAADRV LGTLKAPDLR GYRALWNYLA
GSACYLAAQA GNTTMAAKSR QYYQDAHKCA PNIPWLTAFA RKEVGDAVTI QVDDIALQRQ
VENIASELTR LGATHDRDFA KLEQSILSGL QHHETFEQAQ KELGTLIGFN AGKIESEGSP
DPWWIAESQC IVFEDYVNTT DGTLSVTKAR QATSHPDWMR ANVKESAECE FLTVLVTPAT
KISAAAVVHA SGLLYWRLED FRLFATHALQ IIRQLRTTFF EQGDLVWQAE AAEILKQQGM
DFASIKRVVT ATPVTKCMQA I