Gene SeHA_C1575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1575 
Symbol 
ID6491519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp1522472 
End bp1523689 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content48% 
IMG OID642741798 
ProductDNA topoisomerase 3 
Protein accessionYP_002045443 
Protein GI194450624 
COG category[L] Replication, recombination and repair 
COG ID[COG0550] Topoisomerase IA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.177935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTCT TTATTGCTGA AAAACCATCT TTAGCTAAAG CCATTTTCGA AGGATTAGGT 
GGCAACCCTG CTACTGAAAA GAAAAATGGT TGTTATGAAC ATGGAACTGA TGTTGTCACG 
TGGTGTTTTG GTCATATGCT TGAGCTTTAT GATCCTCAAG ACTATGACGT GAAATACGCC 
GCCTGGCGTT TTGATGACCT GCCGATCAAA ACGCCCTGGC CGCCCAAGTA CAAAATCAGA 
GCCGATGCAC AGCAGCAAAC TAACATCATC TTTTCTCTCA TCGAGAAAGC GACCAGTATC 
GTTCATGCCG GAGACCCGGA CGATGAAGGC TGCCTGTTGG TTGATGAAAT TTTAGATTAC 
GCAAAAAATA CAAAACCCGT TCAGCGCCTT CTCGTTGCAG ATCTCAACCT CGCTCCCGTT 
CAGAAGGCTC TCGCCAATAT GCAGCCTAAC GAGAAATTCA GGGGCATGAC AAATAGCGCT 
CTGGCACGCT CTCTATGCGA TCAGGGATTC GGCTACAACC TTACGCGCGG CTGTACCCTT 
AAAGGGCAGG AGAAAGGCTT TCATGGCGTC CTGAATGTTG GTCGTGTGCA AAGCGCTGTT 
CTTGGGCTGG TTAACCAGAG AACTCTGGCT AACCAGAACC ACACAGAAAG CTTTTATTAT 
GATGTTCAAG CGGCATTGTC GATGAACGGG CATCTCTTAA AGGCCAAATA TCAAGTCGCT 
GAAGGTGATG AAAAGGATGA AAAAAATCGT CTGATCTCTG AGGCTCAGGC GAAGGCGGTT 
GTTGAGCATG TCACGGGTAA AAAAGCTGTT ATTTCTGAAA CGGCCACCAA ACCCGAACAC 
ACTAAACCGC CTATGCCGCT GAACCTTTCG ACACTGCAAC AAATCTGCGC AAGACGTTTC 
GGTTATAAGG CAAAAGAAAC GCTCGATATC ATGCAAGGTC TTTACGAAAC TCATAAGCTT 
TTGACCTATC CGCGAACAGA TAACCGCTAT CTGTCTGACG AGCATTTCAC TCAGGCTGGC 
GATATTGCCG ACGCTATCGG CGCGACGTTA CCAGAGCTGG CGACCGCGAC CGCTGGCATG 
GATAAAACGC AAAAACATAA AGCTTTTAAC GCAAGCAAAA TTGAGGCTCA CCACGCTATT 
ATCCCGACCA CTAAAAGCGG GAAAGGCGTT CAGCTTAATG AGGGGAGCCC GCAGAATTCG 
GAAAAAATCG TACGCTAA
 
Protein sequence
MRLFIAEKPS LAKAIFEGLG GNPATEKKNG CYEHGTDVVT WCFGHMLELY DPQDYDVKYA 
AWRFDDLPIK TPWPPKYKIR ADAQQQTNII FSLIEKATSI VHAGDPDDEG CLLVDEILDY 
AKNTKPVQRL LVADLNLAPV QKALANMQPN EKFRGMTNSA LARSLCDQGF GYNLTRGCTL 
KGQEKGFHGV LNVGRVQSAV LGLVNQRTLA NQNHTESFYY DVQAALSMNG HLLKAKYQVA 
EGDEKDEKNR LISEAQAKAV VEHVTGKKAV ISETATKPEH TKPPMPLNLS TLQQICARRF 
GYKAKETLDI MQGLYETHKL LTYPRTDNRY LSDEHFTQAG DIADAIGATL PELATATAGM 
DKTQKHKAFN ASKIEAHHAI IPTTKSGKGV QLNEGSPQNS EKIVR