Gene SeHA_C1377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1377 
Symbol 
ID6488979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1345798 
End bp1346772 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content53% 
IMG OID642741611 
ProductABC-type dipeptide/oligopeptide/nickel transporter, permease component 
Protein accessionYP_002045259 
Protein GI194451742 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.872874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.311563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGT TCTTCAGTCA TTTTTTGCGG CTGATTATTC TGTTGGTGCT GGTGGCTGTC 
GGCACCTTCA TTTTGCTTAG CTTTTCGCCC GTTGATCCTA TCCGTGCTTA TATTGGCAAC
GATCTGCTCC ATGTTCCGCC AGAACAATAT GCGCGGATTG CGGCGCGCTG GGGGCTTGAC
CAGCCGCTGT GGGAGCGTTT CGGTCACTGG TTTTGGCGTC TGCTCCAGGG CGACATGGGG
TATTCCATGC TGTTCAACAT GCCTGTCGCC AGCGTGATCC GGGAACGTTT TGCGACGTCA
TTCGCGCTGC TGGCAGGCGC CTGGCTATTG TCTGGTGTGC TGGGCGTAAC ATTGGGTTTT
CTGGCCGGAC GTTTTCTCCA CCGTTGGCCG GATAAGATGA TTTGCCGTAT CAGCTACTTA
TTGTCATCGT TGCCCACTTT CTGGATAGCA ATGCTGTTGC TGGCGCTGTT TGCCGTCCGC
TGGCCGGTAT TACCTGTTTG TTGCGCCTGG GACCCCGGAA ATAATGCAGG AACAGCTCTT
TTATCGGAAC GTTTACGCCA TCTTGTGTTG CCGGTATGTG CGTTAAGTCT GTTGGGCATG
GGGCAAATTG CGCTGCATAC GCGAGAAAAA ATAGCCAGCG TAATGAAGAG CGAATTTATT
CGTTTTGCGC GTGCTCAGGG GGATAAAGGA TGGTCGCTGT TATGTCACCA GGTGTTACGT
CATGCGATTA CCCCAGCGCT CTGCTTACAG TTTGCTTCTC TGGGCGAACT GATGGGGGGG
GCGTTACTGG CAGAAAAAGT CTTTGCGTAT CCGGGGCTGG GACAGGCCAC TATCGATGCC
GGCCTGCGTG GCGATGTTCC GCTGCTCATG GGGATCGTTT TATTCTGTAC GCTATTAGTG
TTTGCCGGAA ATACGATTTC AGCCTGGCTT GTGGTGGTGC TTAATCGATC GCTGGAGCGT
CCCGATGCTC TATAA
 
Protein sequence
MKLFFSHFLR LIILLVLVAV GTFILLSFSP VDPIRAYIGN DLLHVPPEQY ARIAARWGLD 
QPLWERFGHW FWRLLQGDMG YSMLFNMPVA SVIRERFATS FALLAGAWLL SGVLGVTLGF
LAGRFLHRWP DKMICRISYL LSSLPTFWIA MLLLALFAVR WPVLPVCCAW DPGNNAGTAL
LSERLRHLVL PVCALSLLGM GQIALHTREK IASVMKSEFI RFARAQGDKG WSLLCHQVLR
HAITPALCLQ FASLGELMGG ALLAEKVFAY PGLGQATIDA GLRGDVPLLM GIVLFCTLLV
FAGNTISAWL VVVLNRSLER PDAL