Gene SeHA_C1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1272 
SymbolsolA 
ID6491124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1250767 
End bp1251885 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content55% 
IMG OID642741509 
ProductN-methyltryptophan oxidase 
Protein accessionYP_002045159 
Protein GI194450208 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID[TIGR01377] sarcosine oxidase, monomeric form 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACG ACCTTATTAT TATCGGCAGC GGTTCGGTTG GCGCCGCCGC TGGTTATTAC 
GCCACCCGCG CCGGGCTAAA GGTCCTGATG ACCGATGCGC ATATGCCGCC TCATCAACAG
GGCAGCCACC ACGGCGATAC CCGTCTTATC CGCCACGCTT ATGGTGAAGG CGAAAAATAT
GTCCCGCTGG TGCTTCGCGC CCAGACGCTT TGGGATGAAC TCTCCACACA CAATGAAGAG
CCTATTTTTG TCCGCTCCGG CGTCGTCAAC CTCGGCCCGG CCGATTCCGC TTTCTTAGCC
AACGTCGCAC GAAGCGCGCA ACAGTGGCAA TTGAACGTCG AGCGCCTGGA CGCGACGGCC
CTCATGACGC GCTGGCCGGA AATTCGCGTG CCCGATAATT ATATCGGGCT GTTTGAAGCT
GACTCCGGTT TCCTGCGCAG CGAATTAGCC ATTACCACAT GGCTTCGTCT GGCCCGAGAG
GCAGGCTGCG CACAGCTATT TAACAGCCCG GTAAGCCATA TTCATCATGA TGATAACGGT
GTGACGATAG AGACGAGTGA AGGCAGCTAC CACGCCAGCA AGGCGCTGAT TAGCGCGGGC
ACCTGGGTCA AAGCGCTGGT ACCGGAGCTG CCCGTTCAGC CCGTACGTAA AGTTTTTGCC
TGGTTTAAGG CGGATGGACG TTACAGCACT AAAAACCGCT TTCCGGCCTT TACCGGCGAA
ATGCCCAACG GCGATCAATA TTACGGTTTC CCGGCGGAGA ACGACGAGTT AAAAATCGGC
AAACACAATG GCGGACAGCG AATACAGGCT CAGGAAGAGC GCAAGCCCTT TGCCGCCGTT
GCCAGCGATG GCGCGGAAGC ATTTCCTTTC CTGCGTAACG TACTGCCGGG TATCGGCGGT
TGTTTACATG GGGCGGCATG TACCTATGAT AATTCGCCGG ACGAGGATTT TATTATCGAT
ACGCTGCCTG GTCATGAGAA TACGCTTGTC ATCACTGGAC TCAGCGGACA TGGTTTTAAA
TTCGCCCCGG TGTTAGGAGA AATCGCTGCG GATTTTGCGT TGGGAAAAAC GCCCTCCTTT
GATCTGACGC CGTTCCGGCT GTCCCGTTTT AGCCAATAA
 
Protein sequence
MKYDLIIIGS GSVGAAAGYY ATRAGLKVLM TDAHMPPHQQ GSHHGDTRLI RHAYGEGEKY 
VPLVLRAQTL WDELSTHNEE PIFVRSGVVN LGPADSAFLA NVARSAQQWQ LNVERLDATA
LMTRWPEIRV PDNYIGLFEA DSGFLRSELA ITTWLRLARE AGCAQLFNSP VSHIHHDDNG
VTIETSEGSY HASKALISAG TWVKALVPEL PVQPVRKVFA WFKADGRYST KNRFPAFTGE
MPNGDQYYGF PAENDELKIG KHNGGQRIQA QEERKPFAAV ASDGAEAFPF LRNVLPGIGG
CLHGAACTYD NSPDEDFIID TLPGHENTLV ITGLSGHGFK FAPVLGEIAA DFALGKTPSF
DLTPFRLSRF SQ