Gene SeHA_C1093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1093 
Symbol 
ID6487735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp1089410 
End bp1091230 
Gene Length1821 bp 
Protein Length606 aa 
Translation table11 
GC content57% 
IMG OID642741335 
Producthypothetical protein 
Protein accessionYP_002044987 
Protein GI194449643 
COG category[S] Function unknown 
COG ID[COG2989] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.565365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.428912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTTA ACAAGATGTG TGGTCGTTGT CTGTCGGCAA TCAGTTTATG CCTGGCCGTA 
ACATTCGCTC CACTGTTCAA TGCGCAGGCC GATGAGCCTG AAATGATACC TGGCGATAGC 
GCCGTTGCCG CGACGGATCA GGCTGGGCCG CAGAAGCAAT CCGCCGCGAC GGCGATTATG 
GCCGGGATTC AGCCGCTGCC GGAGGGCGTT TCAGCCGAGA AAGTCCGGGC TGATTTACAG 
TCGCAGCTTC CTTCCGGCTA TACGCCGGTC TATATGAGCC AGCTGACATT GCTGTATGCC 
GCGCGCGACA TGAAGCCCAT GTGGGATAAT CGCGATGCGG TGAAAGCCTT CCAGCAACAG 
TTGGCGGAGG TGGCGATTGC CGGATTCCAG CCGCAGTTTA CCGCCTGGGT GGCATTGTTG 
ACCGATCCCG CCGTAAACGG TATGGCGCGC GATGTTGTGT TGTCAGACGC CATGATGGGC 
TATCTCCATT TCATTGCGAA TATCCCCGTC AAAGGCCAGC GCTGGTTATA TAGCAACAAA 
CCTTACGCAT TGGCGACGCC GCCAGTCTCG GTGATTAACC AGTGGCAAAT CGCGCTGGAA 
GAGGGGCAGT TGCCGATGTT TGTCGCCAGC CTGGCGCCGC AGCACCCACA GTATGCGCCC 
ATGCATGACG CGTTGCTGAA GCTGGTGGCG GACTCTCGCC CGTGGCCGCA GTTGGCCAAT 
ACCGCGACGC TGCGCCCGGG GCAATGGAGT AACGATGTGC CTGCGCTGCG CGAAATATTA 
CAGCGTACGG GGATGCTGGA TGGCGGTCCA AAGATAGCCT TACCCGGCGA TAACACTACT 
GATAGCGCCG TCGTTAGCCC CTCCGCCGTG GTCGACGAAC AAACGGCCCG CCGTAGTAAG 
CCGGCTCCGG CGGCACGCGC CTACGATCGT GAACTGGTCG AGGCGGTAAA GCGTTTTCAG 
GCATGGCAAG GGCTGGGGGC GGATGGCGTT ATTGGCCCGG CGACGCGTAA CTGGCTTAAT 
ATGACCCCCG CGCAACGCGC AGGCGTACTG GCACTGAATA TCCAACGTTT ACGCCTGCTG 
CCAGCGGAAC TCTCTACCGG TATTATGGTA AACATTCCCG CTTATTCGCT GGTCTACTAT 
CAGAATGGCA ACCAGGTGCT GGCTTCAAGG GTGATCGTCG GGCGTCCCGA TCGTAAAACG 
CCGATGATGA GCAGCGCGCT GAATAATGTG GTGGTGAACC CGCCGTGGAA CGTTCCGCCC 
ACGCTTGCGC GTAAAGACAT TTTACCGAAG GTGTGGAATG ACCCAGGCTA TCTGGAGCGC 
CATGGCTACA CCGTGATGCG CGGCTGGAAC AGCAAAGAAG CGATCGATCC GTGGCAGGTT 
GACTGGGCCA CCATTACGCC ATCGAATCTT CCGTTCCGTT TCCAGCAGGC GCCAGGTGCG 
CACAATTCGC TGGGGCGTTA TAAATTTAAT ATGCCGAGTT CAGATGCGAT CTATCTGCAC 
GATACGCCTA ACCATACTCT CTTTCAGCGT GACGCCAGGG CGTTAAGTTC CGGCTGCGTG 
CGGGTCAATA AGGCCTCTGA ACTGGCGAAT ATGCTCTTGC AGGATGCTGG CTGGAACGAT 
GCGCGGATCT CTGGCGCCCT GAAGCAAGGC GACACGCGGT ATGTCAATAT CCGGCAGAAC 
ATTCCAGTAA ATCTTTACTA TCTGACCGCG TTTGTCGGCG CAGATGGACG TATGCAATAT 
CGTACAGATA TTTACAATTA CGATCTCACA GCGCGATCCA GCGCACAAAT TGTGCCAAAG 
GTTGAACAAT TAATCAGGTA A
 
Protein sequence
MLLNKMCGRC LSAISLCLAV TFAPLFNAQA DEPEMIPGDS AVAATDQAGP QKQSAATAIM 
AGIQPLPEGV SAEKVRADLQ SQLPSGYTPV YMSQLTLLYA ARDMKPMWDN RDAVKAFQQQ 
LAEVAIAGFQ PQFTAWVALL TDPAVNGMAR DVVLSDAMMG YLHFIANIPV KGQRWLYSNK 
PYALATPPVS VINQWQIALE EGQLPMFVAS LAPQHPQYAP MHDALLKLVA DSRPWPQLAN 
TATLRPGQWS NDVPALREIL QRTGMLDGGP KIALPGDNTT DSAVVSPSAV VDEQTARRSK 
PAPAARAYDR ELVEAVKRFQ AWQGLGADGV IGPATRNWLN MTPAQRAGVL ALNIQRLRLL 
PAELSTGIMV NIPAYSLVYY QNGNQVLASR VIVGRPDRKT PMMSSALNNV VVNPPWNVPP 
TLARKDILPK VWNDPGYLER HGYTVMRGWN SKEAIDPWQV DWATITPSNL PFRFQQAPGA 
HNSLGRYKFN MPSSDAIYLH DTPNHTLFQR DARALSSGCV RVNKASELAN MLLQDAGWND 
ARISGALKQG DTRYVNIRQN IPVNLYYLTA FVGADGRMQY RTDIYNYDLT ARSSAQIVPK 
VEQLIR