Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C1086 |
Symbol | kdsB |
ID | 6488050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 1079054 |
End bp | 1079800 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642741328 |
Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
Protein accession | YP_002044980 |
Protein GI | 194449889 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.611229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 0.292816 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTCG TCGTCATCAT TCCGGCCCGT TTTTCATCTA CCCGACTGCC AGGCAAACCA TTAGTGGATA TTAATGGTAA ACCCATGATT GTTCATGTCC TGGAGCGGGC GCGCGAATCT GGCGCGGAAC GCATTATTGT CGCGACCGAT CATGAAGACG TGGCTCGTGC GGTAGAAGCG GCTGGCGGCG AAGTGTGCAT GACGCGCGCC GATCACCAGT CCGGTACCGA ACGGTTGGCT GAAGTGGTAG AGAAGTGCGG ATTCAGCGAC GATACCGTTA TTGTGAACGT TCAGGGCGAT GAGCCGATGA TCCCGGCGGT TATTATTCGC CAGGTCGCGG AAAATCTGGC GCAGCGCCAG GTTGGCATGG CGACGCTGGC GGTGCCGATT CACAGCGCCG AAGAAGCGTT TAACCCGAAT GCGGTAAAAG TCGTGCTGGA TGCCGAAGGC TATGCGCTCT ACTTTTCCCG GGCGACGATT CCCTGGGATC GCGACCGCTT TGCAAAAAGT CTGGAAACGG TAGGGGATAC TTGCCTTCGT CACCTGGGCA TTTATGGCTA TCGCGCGGGG TTTATCCGCC GTTACGTGAG CTGGCAACCC AGCCCGCTGG AACATATTGA AATGCTGGAG CAACTCCGTG TGCTGTGGTA CGGCGAAAAA ATTCATGTCG CCGTCGCCAA AGCGGTGCCC GGTACGGGCG TAGACACCGC CGACGACCTG GAGCGCGTGC GCGCTGAAAT GCGTTAA
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Protein sequence | MSFVVIIPAR FSSTRLPGKP LVDINGKPMI VHVLERARES GAERIIVATD HEDVARAVEA AGGEVCMTRA DHQSGTERLA EVVEKCGFSD DTVIVNVQGD EPMIPAVIIR QVAENLAQRQ VGMATLAVPI HSAEEAFNPN AVKVVLDAEG YALYFSRATI PWDRDRFAKS LETVGDTCLR HLGIYGYRAG FIRRYVSWQP SPLEHIEMLE QLRVLWYGEK IHVAVAKAVP GTGVDTADDL ERVRAEMR
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