Gene SeHA_C1029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1029 
Symbol 
ID6491729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1010240 
End bp1011070 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content57% 
IMG OID642741271 
ProductN-acetylmuramoyl-L-alanine amidase AmiD 
Protein accessionYP_002044924 
Protein GI194448017 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones100 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGC TACTGTGGCT GGTGGGTCTC GCGTTGCTGT TAACAGGCTG CGCGAGCGAA 
AAAGGAATTA TCGATAAAGA GGGATATCAG CTTGATACCC GACATCGGGC GCAGGCGGCC
TATCCGCGCA TTAAAGTCCT GGTGATTCAC TATACGGCGG AAAACTTTGA CGTTTCGCTG
GCGACGTTAA CGGGTCGCAA CGTCAGTTCG CATTACCTGA TTCCCGCAAC CCCGCCATTA
TATGGCGGTA AACCGCGCAT CTGGCAACTG GTGCCGGAAC AGGATCAGGC CTGGCATGCG
GGCGTCAGTT TCTGGCGAGG CGCCACGCGT CTCAATGATA CGTCTATTGG CATTGAGCTG
GAAAATCGTG GTTGGCGAAT GTCCGGCGGG GTGAAATCTT TCGCGCCGTT TGAATCCGCG
CAAATTCAGG CATTGATTCC GTTAGCGAAG GATATTATCG CGCGCTATAA CATCAAACCG
CAGAATGTGG TGGCCCATGC GGATATCGCG CCGCAGCGTA AAGACGATCC CGGCCCGCGC
TTCCCGTGGC GCGAGCTGGC GGCGCAGGGG ATTGGCGCCT GGCCTGACGC CCAGCGTGTG
GCGTTTTATC TGGCTGGACG CGCGCCGTAT ACGCCAGTCG ATACCGCAAC GGTGCTTGCG
TTACTCTCGC GCTATGGCTA TGAAGTCAAA GCCGATATGA CGGCACGCGA GCAGCAGCGG
GTGATTATGG CGTTCCAGAT GCACTTCCGT CCGGCGCAAT GGAACGGTAT CGCAGATGCC
GAAACGCAGG CGATTGCCGA AGCATTACTG GAGAAGTACG GCCAGGATTA A
 
Protein sequence
MKALLWLVGL ALLLTGCASE KGIIDKEGYQ LDTRHRAQAA YPRIKVLVIH YTAENFDVSL 
ATLTGRNVSS HYLIPATPPL YGGKPRIWQL VPEQDQAWHA GVSFWRGATR LNDTSIGIEL
ENRGWRMSGG VKSFAPFESA QIQALIPLAK DIIARYNIKP QNVVAHADIA PQRKDDPGPR
FPWRELAAQG IGAWPDAQRV AFYLAGRAPY TPVDTATVLA LLSRYGYEVK ADMTAREQQR
VIMAFQMHFR PAQWNGIADA ETQAIAEALL EKYGQD