| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C0423 |
|---|
| Symbol | |
|---|
| ID | 6492348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 421964 |
|---|
| End bp | 422842 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642740695 |
|---|
| Product | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase |
|---|
| Protein accession | YP_002044362 |
|---|
| Protein GI | 194450752 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 0.000322521 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGG TTCAATATCT TGTGAACGGT GGCAAACGCT ACGGCATTAT GCAGGAAATC
GGAATAATTG ATCTCTCGCA GCGGCTTGGC GACAAATATC CCACTTTGAA ATCTCTCCTG
TGCGCTAATG CGCTGACGGA TGCGGCGTTA TGGTGTGATG AGCCGGCGGA TTATTACTAC
CAGGAAGTCA CTTTTCTGCC GGTGATTGAC GATCCGCAGA AGATCATCTG TGTCGGAATG
AATTATGCCG ATAAGCGTAT TGAGTTTAAT GAAACCAACC CGGCCCCAAC CCTTTTTGTC
CGCTTTGCGG ATTCTCAGAC CGGGCATAAT GGCCTGCTGC TGAAGCCTGA AAATACCAAT
GAGTTCGACT ACGAAGGTGA ATTAGCCGTA GTGATTGGGC GGCGATGCTC CCGGGTCAGC
GCTGAGGATG CTTTAGATTA TGTCGCCGGA TACAGCTGCT ATATGGATGG TTCAGTGAGG
GACTGGCAGC ATAGCTGGTT TACGGCTGGA AAAAACTGGC CTTCGACAGG ATCATTCGGT
CCGTGTCTGG TGACCACAGA CGACATTCCC GATCCCCAGA TGCTACGTTT ACTGACACGA
CTAAACGGGC GGGAGGTGCA GAACGAATCT ACGGCAAATA TGATCCATCC TATCGCTTCA
CTCATTGCTT ATATAAGCAC CTTTACTCTG CTTTCCCCTG GCGACACGAT CCTCACAGGG
TCGCCTGGTG GAGTGGGCAA AAAACGCGTT CCACCGCTGT TTTTACACGA TGGTGATGTT
ATTGAAGTTG AGATTGAACA TATTGGAACC CTGCGCAATG TCGTCCGGGA TAGCCGTTAT
TTAACATCAT CTGTTAGCTG GCATGACGGG AGAAAGTGA
|
|---|
| Protein sequence | MKLVQYLVNG GKRYGIMQEI GIIDLSQRLG DKYPTLKSLL CANALTDAAL WCDEPADYYY
QEVTFLPVID DPQKIICVGM NYADKRIEFN ETNPAPTLFV RFADSQTGHN GLLLKPENTN
EFDYEGELAV VIGRRCSRVS AEDALDYVAG YSCYMDGSVR DWQHSWFTAG KNWPSTGSFG
PCLVTTDDIP DPQMLRLLTR LNGREVQNES TANMIHPIAS LIAYISTFTL LSPGDTILTG
SPGGVGKKRV PPLFLHDGDV IEVEIEHIGT LRNVVRDSRY LTSSVSWHDG RK
|
|---|
| |