Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0421 |
Symbol | leuC |
ID | 6490327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 419900 |
End bp | 421321 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642740693 |
Product | isopropylmalate isomerase large subunit |
Protein accession | YP_002044360 |
Protein GI | 194447525 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.00124409 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTGCTA AAACGCTGTA TGAAAAATTA GTTGAGTCAC ATACCATTCG TGAACTTGAT AACGAAGGAC ATGTTTTACT TTATATTGAT CGTTCAATAC TGAATGAATA TACCAGCCCG CAGGCATTTA GCGGGTTAAG AGAACGCGGT CGCACCGTTC GGCACCCCGA CACGTTTTTA TTGAATATTG ACCATGTTAA TCCCACGCGG TCGCAACGGG ATGTCTTAAT GACCGATCCG GGAGGACAGC TACAGGTTGA TTACTTTCGG GAAAATGCCG CTGACTTTGG CATCACATTA TTTGATGTGC TGGATCCGCG TCAGGGGATT GAACACGTGG TTGCTCATGA ACAAGGGCTA GTGATGCCTG GCATGGTGAT CGCCGCCGGG GATAGTCACA CGACAACCTA CGGTGCATTT GGCGCGCTGG GCTTTGGTAT CGGGACGTCG GAAATTGAAC ATCTGCTGGC CACGCAGACG TTGGTTTACC GCAAGCTCAA AACCATGCGC GTAAGTGTTC AGGGAGAGCT ACCTTTCGCC TGTTCCGCAA AAGATATTGT TCTTGAATTG CTTGAACGTA TTGGCGCTGA TGGCGCGACG GGATATGCCA TTGAATTTGT GGGTGAGGCC ATCAGCGCGT TGAGCGTTGA AGGACGAATG ACGCTCTGCA ACATGGCGGT AGAAGCGGGG GCGCGTGGTG CTATTATTGC GCCGGATAAA AAGGTTTTTG ACTATATCTA CGGTAAACCG CAAATGCCTG TAGGTGAACT CTGGCAGCAG GCATTGCTGG AATGGTCACA GTTGAGCAGC GATGCTGATG CGGTATTTGA TAAGACGGTG GCGATCAACT GCCATGATCT TGAGCCTAAA GTCACCTGGG GAATCAGTCC GGATCAAACA GGTTCCATCA CCGGACGTGT CCCTTTCCCG GAACAGGAAA CCAATCCGCT TAAGCGCCTG GCGCTTGAGA AGGCCCTTCA TTACATGGGA TTAACGGCTG GCATGTTGCT GAAAGATATT CGTATCTCTC ACGCTTTTAT TGGTTCATGC ACAAATGGTC GCATTGAGGA TTTGCGTGCC GTTGCGAAGG TGCTTGAAGG GCGCAAAATC GCCAGCCATG TTCGCGGGAT CATTGTGCCT GGCTCAACAA TGGTAAGACG CCAGGCGGAA GAAGAAGGAC TGGCGAAAAT CTTTATTGCT GCCGGTTTTG AATGGCGGCA GTCGGGTTGC TCAATGTGCC TTGCGATGAA TGAAGATGTG TTGTCGCCCG GCGATCGCTG TGCATCAGGT ACGAACCGTA ATTTCCCTGG ACGACAGGGC GCTGGAGCAA GAACGCATTT GATGAGCCCG GCGATGGTTG CGGCGGCGGC GGTAGCGGGG CATCTGGTCG ATGTTCGGTC ATTACTTCAG GCAGGGGAAT AA
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Protein sequence | MSAKTLYEKL VESHTIRELD NEGHVLLYID RSILNEYTSP QAFSGLRERG RTVRHPDTFL LNIDHVNPTR SQRDVLMTDP GGQLQVDYFR ENAADFGITL FDVLDPRQGI EHVVAHEQGL VMPGMVIAAG DSHTTTYGAF GALGFGIGTS EIEHLLATQT LVYRKLKTMR VSVQGELPFA CSAKDIVLEL LERIGADGAT GYAIEFVGEA ISALSVEGRM TLCNMAVEAG ARGAIIAPDK KVFDYIYGKP QMPVGELWQQ ALLEWSQLSS DADAVFDKTV AINCHDLEPK VTWGISPDQT GSITGRVPFP EQETNPLKRL ALEKALHYMG LTAGMLLKDI RISHAFIGSC TNGRIEDLRA VAKVLEGRKI ASHVRGIIVP GSTMVRRQAE EEGLAKIFIA AGFEWRQSGC SMCLAMNEDV LSPGDRCASG TNRNFPGRQG AGARTHLMSP AMVAAAAVAG HLVDVRSLLQ AGE
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