Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0357 |
Symbol | pepD |
ID | 6487929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 368937 |
End bp | 370394 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642740632 |
Product | aminoacyl-histidine dipeptidase |
Protein accession | YP_002044300 |
Protein GI | 194448410 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2195] Di- and tripeptidases |
TIGRFAM ID | [TIGR01893] aminoacyl-histidine dipeptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0000000446766 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTCTGAAC TGTCTCAGTT ATCCCCACAA CCTTTGTGGG ATATTTTTGC CAAAATCTGT TCTATTCCTC ACCCGTCCTA TCACGAAGAG CAACTCGCGG AACATATTGT GAGTTGGGCC AAAGAGAAAG GCCTTTACGT GGATCGCGAC CAGGTCGGTA ATATTCTGAT CCGTAAGCCC GCCACTGCAG GTATGGAAAA TCGCAAGCCG GTCGTTTTAC AGGCGCATCT GGATATGGTG CCGCAAAAAA ATAGCGACAC CGTTCACGAC TTCACTACAG ATCCTATCCA GCCTTATATT GATGGCGAAT GGGTTAAAGC GCGCGGTACT ACGCTCGGCG CCGACAATGG TATTGGAATG GCTTCTGCGT TAGCGGTACT GGCTGATGAT AATGTCGTCC ATGGCCCGCT GGAAGTGCTG CTGACCATGA CCGAAGAAGC GGGCATGGAT GGCGCGTTCG GCCTCCAGTC CGGCTGGTTG CAGGCCGACA TCCTGATCAA CACCGACTCT GAAGAAGAAG GTGAGATCTA TATGGGCTGC GCAGGCGGTA TTGATTTTAC CTCTAATCTG CCGTTGACCC GTGAAGCTGT ACCCGCAGGA TTTGCGTGCT TTAAGCTAAC CCTGAAAGGC CTGAAAGGCG GCCACTCCGG TGGTGAAATT CACCTCGGTC TTGGCAATGC CAACAAATTG CTGGCGCGTT TTCTGGCCGG GCACGCAGAA GAACTGGATC TGCGTCTGAT CGATTTCAAC GGCGGCACGC TGCGTAACGC GATTCCGCGC GAAGCGTTCG CTACCCTCGC CGTTGCCGCA GACAACGTAG GCGCGCTGAA AACATTAGTG AACGCTTACC AGGATATTCT GAAAAACGAA CTGGCGGAAA AAGAGAAAAA CCTGACGCTG CAACTCAATG AGGTTGCCAG TGATAAAGCC GCATTGACCG CGCCGTCACG CGATACCTTT GTGCGCCTGC TGAACGCAAC GCCGAACGGC GTGATCCGCA ATTCAGACGT GGCGAAAGGC GTAGTGGAAA CATCGCTGAA CGTTGGCGTG GTCACAATGT CCGATGCGAA TGTCGAAATT CACTGCCTGA TTCGCTCTCT TATCGACAGC GGTAAAGATT ATGTGGTGAG TATGCTGGAT TCGCTGGGCA AGCTGGCTGG CGCGAAAACC GAAGCAAAAG GCAGCTATCC TGGCTGGCAG CCCGATGCGA ACTCGCCGGT CATGCACCTG GTGCGGGAAA CCTATCAGCG TCTGTTCAAC AAGACACCGA ACATCCAGAT TATCCACGCC GGCCTGGAAT GCGGTCTGTT TAAGAAACCC TATCCGGATA TGGACATGGT TTCTATTGGG CCTACCATTA CCGGACCTCA CTCTCCGGAT GAGCAGGTAC ATATCGAAAG CGTCGGCCAC TACTGGACTC TGCTGACCGA ATTGCTGAAA GCGATTCCTG CGAAGTAA
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Protein sequence | MSELSQLSPQ PLWDIFAKIC SIPHPSYHEE QLAEHIVSWA KEKGLYVDRD QVGNILIRKP ATAGMENRKP VVLQAHLDMV PQKNSDTVHD FTTDPIQPYI DGEWVKARGT TLGADNGIGM ASALAVLADD NVVHGPLEVL LTMTEEAGMD GAFGLQSGWL QADILINTDS EEEGEIYMGC AGGIDFTSNL PLTREAVPAG FACFKLTLKG LKGGHSGGEI HLGLGNANKL LARFLAGHAE ELDLRLIDFN GGTLRNAIPR EAFATLAVAA DNVGALKTLV NAYQDILKNE LAEKEKNLTL QLNEVASDKA ALTAPSRDTF VRLLNATPNG VIRNSDVAKG VVETSLNVGV VTMSDANVEI HCLIRSLIDS GKDYVVSMLD SLGKLAGAKT EAKGSYPGWQ PDANSPVMHL VRETYQRLFN KTPNIQIIHA GLECGLFKKP YPDMDMVSIG PTITGPHSPD EQVHIESVGH YWTLLTELLK AIPAK
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