Gene SeHA_C0210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0210 
Symbol 
ID6489048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp216992 
End bp217744 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content47% 
IMG OID642740489 
Productputative chaperone protein EcpD 
Protein accessionYP_002044163 
Protein GI194451953 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3121] P pilus assembly protein, chaperone PapD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.304462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAATA CGGTTATTAC AAAGGGATTT AAAACCACCT GCTTCGCTGC CGCGGCCTTC 
ACGGCATTTG CCACATTCCA GGTAAACGCA GATATCGTCA TATCCGGAAC ACGTATTGTG
TACCCAGCGT CATCAAAAGA CGTGATTGTG AACCTGGATA ACCGGGGCAA TAAACCTCTA
CTGGTGCAAA CCTGGCTGGA TGACGGGCGT GACGGTGTTG ACCCGCAGGA GCTAAAACTG
CCGTTTGTCA TTACGCCTCC GGTATCTCGT ATCGATCCAC AAAAAGGGCA ATCCTTGCGT
ATTACGTATA TGGGTAGCGC ATTACCTCAG GATCGGGAAT CGCTGTTTTG GTTTAACGTG
CTGGAAATTC CGCCAAAATC AAAAGCGAAA GAAGGCGAGA GTTTAAATCA ACTTCAACTC
GCCTTTCGCA CGCGGATCAA ATTATTTTTC CGCCCGGATG GCCTGAAAGG CACGCCTGGC
GATGCGGCTG CAAACCTGAA ATGGTCGCAG AAAAAAGAAG GCAATACGCT TTCACTGTTT
GCCCAAAATG ACAGCGCGTA CAACGTTTCT ATTTCCAACG TAAAATTAAA AGTGGGCGGT
AAAGAATATA CTGTCGACAG CAAATCCGTT TTACCCTTTA GCGGGGTCAG CATGCCCGTA
AAAGGTCTTT CGAATAATAT TAACGGTACC GTTATCTATA ACACCATTAA TGATAATGGC
GGCACCAACA AACGAGAAGC CAAAATAGAC TAA
 
Protein sequence
MVNTVITKGF KTTCFAAAAF TAFATFQVNA DIVISGTRIV YPASSKDVIV NLDNRGNKPL 
LVQTWLDDGR DGVDPQELKL PFVITPPVSR IDPQKGQSLR ITYMGSALPQ DRESLFWFNV
LEIPPKSKAK EGESLNQLQL AFRTRIKLFF RPDGLKGTPG DAAANLKWSQ KKEGNTLSLF
AQNDSAYNVS ISNVKLKVGG KEYTVDSKSV LPFSGVSMPV KGLSNNINGT VIYNTINDNG
GTNKREAKID