Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0210 |
Symbol | |
ID | 6489048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 216992 |
End bp | 217744 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642740489 |
Product | putative chaperone protein EcpD |
Protein accession | YP_002044163 |
Protein GI | 194451953 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.304462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 87 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAATA CGGTTATTAC AAAGGGATTT AAAACCACCT GCTTCGCTGC CGCGGCCTTC ACGGCATTTG CCACATTCCA GGTAAACGCA GATATCGTCA TATCCGGAAC ACGTATTGTG TACCCAGCGT CATCAAAAGA CGTGATTGTG AACCTGGATA ACCGGGGCAA TAAACCTCTA CTGGTGCAAA CCTGGCTGGA TGACGGGCGT GACGGTGTTG ACCCGCAGGA GCTAAAACTG CCGTTTGTCA TTACGCCTCC GGTATCTCGT ATCGATCCAC AAAAAGGGCA ATCCTTGCGT ATTACGTATA TGGGTAGCGC ATTACCTCAG GATCGGGAAT CGCTGTTTTG GTTTAACGTG CTGGAAATTC CGCCAAAATC AAAAGCGAAA GAAGGCGAGA GTTTAAATCA ACTTCAACTC GCCTTTCGCA CGCGGATCAA ATTATTTTTC CGCCCGGATG GCCTGAAAGG CACGCCTGGC GATGCGGCTG CAAACCTGAA ATGGTCGCAG AAAAAAGAAG GCAATACGCT TTCACTGTTT GCCCAAAATG ACAGCGCGTA CAACGTTTCT ATTTCCAACG TAAAATTAAA AGTGGGCGGT AAAGAATATA CTGTCGACAG CAAATCCGTT TTACCCTTTA GCGGGGTCAG CATGCCCGTA AAAGGTCTTT CGAATAATAT TAACGGTACC GTTATCTATA ACACCATTAA TGATAATGGC GGCACCAACA AACGAGAAGC CAAAATAGAC TAA
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Protein sequence | MVNTVITKGF KTTCFAAAAF TAFATFQVNA DIVISGTRIV YPASSKDVIV NLDNRGNKPL LVQTWLDDGR DGVDPQELKL PFVITPPVSR IDPQKGQSLR ITYMGSALPQ DRESLFWFNV LEIPPKSKAK EGESLNQLQL AFRTRIKLFF RPDGLKGTPG DAAANLKWSQ KKEGNTLSLF AQNDSAYNVS ISNVKLKVGG KEYTVDSKSV LPFSGVSMPV KGLSNNINGT VIYNTINDNG GTNKREAKID
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