| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C0206 |
|---|
| Symbol | |
|---|
| ID | 6489112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 212518 |
|---|
| End bp | 213117 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642740485 |
|---|
| Product | putative fimbrial protein |
|---|
| Protein accession | YP_002044159 |
|---|
| Protein GI | 194447892 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.753948 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 89 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAGT TACTGTTTCT TTTACGCCAG CCCAGTCTTA TGTTGCTTAT GGGTCTGACG
GGCGGGTTTT GGTCTGGCAT CAGCCAGGCG GGTTCCAATT TGGATATCAA TCTGACCGCC
AGTATTGTTA ACAGCACCTG CAAACTCAGT CTGGAAAATG GGGGGGAAGT CTACCTTCCC
AACGTCACGC GGGCATGGTT TTACAATAAC GACGGCAGCA GTAAATATGC GCCTACCGAC
GAGGCGGGCG GCACGCCTTT TAACGTGCGT CTCGAAGACT GTGCAGATAA CAGTAGCATC
AAGCAGTTGA TGTTCAGCTT TACGCCGCAA TCCGGTTTTT GGAGCAACCA AAACCAGGTT
TTCAAAAATG ATGCCACAAC AGGCGCGGCG CAAAACGTGG GGATCGTCAT TTTCTCGGCA
GACTATAAAA CTAACGTCTT AAACAGCGAT GGCAGTTCTA ACGTAGTTTA CGACGTCAGC
GGAAAAAGCA GTTCGCTGTA TTTAACGGAT TATCAGTTTT ACGCGCGCTA TCAGAATACG
GGCGCAGTTG TCAGCGGCGT TGTCACCAGC AACGTGTTGG TTGACGTCAG CTACGAATAA
|
|---|
| Protein sequence | MQQLLFLLRQ PSLMLLMGLT GGFWSGISQA GSNLDINLTA SIVNSTCKLS LENGGEVYLP
NVTRAWFYNN DGSSKYAPTD EAGGTPFNVR LEDCADNSSI KQLMFSFTPQ SGFWSNQNQV
FKNDATTGAA QNVGIVIFSA DYKTNVLNSD GSSNVVYDVS GKSSSLYLTD YQFYARYQNT
GAVVSGVVTS NVLVDVSYE
|
|---|
| |